August 2013 - Release-team - mailman3.cels.anl.gov

Re: [Release-team] Release Team Telecon
by Nomi Harris 18 Aug '13

18 Aug '13

On Aug 18, 2013, at 5:22 AM, Thomas Brettin <brettin(a)mcs.anl.gov> wrote: > where do we stand with our public release notices and products? I'm ready to do my parts (see forwarded message) when the other things are done. I guess I can start writing the release announcement. However, I have to prepare slides for Adam's talk (due Tues), finish a report about BOSC (due today), and I have meetings all day Mon, so I might have to do that on Tues or Wed. Note that I will be away Aug 24-29 (and mostly tied up on Aug 23, including the evening), so hopefully we can get the release finished and announced before i leave. By the way, the things I listed under Services page (http://www.kbase.us/developer-zone/services/) as jobs for Tom Brown, I'll just do them myself, it'll be faster. Maybe Tom Brown can do them next time. Nomi Begin forwarded message: > From: Nomi Harris <nlharris(a)lbl.gov> > Subject: Finishing this release > Date: August 12, 2013 10:03:02 PM PDT > To: "Tom S. Brettin" <Brettin(a)mcs.anl.gov> > Cc: Neal Conrad <nconrad(a)mcs.anl.gov>, Michael Sneddon <mwsneddon(a)lbl.gov>, Nomi Harris <NLHarris(a)lbl.gov> > > Some thoughts about finishing this release. > > First, what are the new services and are there any old services that we're no longer offering? > New: > expression > functional_ortholog_predictor > Any others?? > > Renamed: > aux_store -> shock_service > Is this description still ok? "Command line client tools for accessing the KBase auxiliary store" > > Deleted: > Were any services deleted/retired? > > > Here are the things that need to happen (that I'm involved with on some level--obviously this is not the complete list) to finish the release: > Downloads page: > - Push new dmg and ubuntu image to http://kbase.us/developer-zone/downloads/ (Tom Brown, with help from Neal?) > - Push new type compiler tar file to downloads (Tom Brown, with help from Neal?) > - Move info for previous releases down to "Older Releases" section (Tom Brown) > > API docs: > - Push new and updated API docs to kbase.us (Tom Brown, with help from Neal?) > - Add new API docs to http://kbase.us/developer-zone/api-documentation/ (note that this page is going to be reorganized soon--the command-line docs are going to move to a different page, and I'm hoping we can come up with a better sort order for the services--even alphabetical would be better than random!) (Tom Brown, with help from Nomi) > > Release notes: > - Push new and updated release notes to kbase.us (Tom Brown, with help from Neal?) > > Services page (http://www.kbase.us/developer-zone/services/) > - Add new services, including descriptions and links (Tom Brown, with help from Nomi) > - Add links to release notes to all services that have release notes (Tom Brown) > - Add any new links to API docs (Tom Brown, with help from Neal?) > > Announcement: > - Write release announcement, send to pr-approval (Nomi) > [Note to self: if there are big improvements to IRIS or other Labs, mention them in the announcement.] > - Post announcement to blog (Nomi) > > > > > On Aug 16, 2013, at 7:46 PM, Nomi Harris <nlharris(a)lbl.gov> wrote: > >> In an ideal world, if we had the person-time available, then sure. As it is, I'm not sure who would take on the other responsibilities of the people who are working on releases AND other things (e.g., Dan, Shane, Mike). (I view Miriam as already fully committed to the release team--thank goodness for that!) >> Nomi >> >> On Aug 15, 2013, at 2:44 PM, Thomas Brettin <brettin(a)mcs.anl.gov> wrote: >> >>> I'm beginning to think that the release team should be a team dedicated to releases. >>> >>> Thoughts anyone? >>> >>> Tom >>> >>> >>> On Aug 13, 2013, at 2:57 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: >>> >>>> Here are my issue modules: >>>> >>>> Assembly - developers claims that fixes have been made but these have not >>>> been retested. >>>> Auth client and service - Not passing testing >>>> Communities_api - minor problems with 3 commands (in scripts but not in >>>> deployment). Mostly okay as is. >>>> FBA modeling - failing due to workspace deployment problems >>>> Functional ortholog predictor - COMMANDS file has been added since testing >>>> but the command returns a non-zero value >>>> ID Server - Issues with the command-line commands have been fixed since >>>> testing. Needs new tag before deployment >>>> Probabilistic Annotation - still failing testing >>>> Communities QC - still failing testing >>>> SHOCK - never passed deployment - hence never tested >>>> >>>> Miriam >>>> >>>> On 8/13/13 3:41 PM, "Nomi L. Harris" <nlharris(a)lbl.gov> wrote: >>>> >>>>> I'm at lunch but Mike is the tech doc lead. Feel free to have the meeting >>>>> without me. I pretty much said my piece in my email last night. >>>>> Nomi >>>>> >>>>> Sent from my iPhone >>>>> >>>>> On Aug 13, 2013, at 12:26 PM, Dan Olson <dolson(a)mcs.anl.gov> wrote: >>>>> >>>>>> Ok.. I primarily wanted to make go over the outstanding issues. The >>>>>> cleared for production >>>>>> column is fairly empty. >>>>>> >>>>>> Nomi, when you get back, can you have a look. I think some may have >>>>>> been waiting on API doc checks? >>>>>> >>>>>> ----- Original Message ----- >>>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>>> To: "Dan Olson" <dolson(a)mcs.anl.gov>, release-team(a)kbase.us >>>>>>> Sent: Tuesday, August 13, 2013 2:23:58 PM >>>>>>> Subject: Re: [Release-team] Release Team Telecon >>>>>>> >>>>>>> Nomi went to lunch. >>>>>>> >>>>>>> >>>>>>> On 8/13/13 3:22 PM, "Dan Olson" <dolson(a)mcs.anl.gov> wrote: >>>>>>> >>>>>>>> Hi all, >>>>>>>> >>>>>>>> I apologize, I had a meeting that backed up to this that ran long.. >>>>>>>> >>>>>>>> Can we regroup? >>>>>>>> >>>>>>>> ----- Original Message ----- >>>>>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>>>>> To: brettin(a)mcs.anl.gov, "Dan Olson" <dolson(a)mcs.anl.gov> >>>>>>>>> Sent: Tuesday, August 13, 2013 2:04:00 PM >>>>>>>>> Subject: Re: Release Team Telecon >>>>>>>>> >>>>>>>>> Who is leading this meeting? >>>>>>>>> >>>>>>>>> Nomi, Mike, and Miriam are in attendance. >>>>>>>>> >>>>>>>>> From: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>>>>> When: 3:00 PM - 3:45 PM August 13, 2013 >>>>>>>>> Subject: Release Team Telecon >>>>>>>>> Location: 888-850-4523, passcode: 416791, leader passcode (Dan >>>>>>>>> only) >>>>>>>>> 4167913 >>>>>>>>> >>>>>>>>> >>>>>>>>> The following is a new meeting request: >>>>>>>>> Subject: Release Team Telecon >>>>>>>>> Organizer: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>>>>> Sent By: "India S. Gordon" >>>>>>>>> <igordon(a)cels.anl.gov<mailto:[email protected]>> >>>>>>>>> Location: 888-850-4523, passcode: 416791, leader passcode >>>>>>>>> (Dan >>>>>>>>> only) 4167913 >>>>>>>>> Time: Tuesday, August 13, 2013, 2:00:00 PM - 2:45:00 PM GMT >>>>>>>>> -06:00 >>>>>>>>> US/Canada Central >>>>>>>>> Invitees: >>>>>>>>> release-team(a)kbase.us<mailto:[email protected]> >>>>>>>>> *~*~*~*~*~*~*~*~*~* >>>>>>>> _ >

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Re: [Release-team] Release Team Telecon
by Thomas Brettin 18 Aug '13

18 Aug '13

where do we stand with our public release notices and products? On Aug 16, 2013, at 7:46 PM, Nomi Harris <nlharris(a)lbl.gov> wrote: > In an ideal world, if we had the person-time available, then sure. As it is, I'm not sure who would take on the other responsibilities of the people who are working on releases AND other things (e.g., Dan, Shane, Mike). (I view Miriam as already fully committed to the release team--thank goodness for that!) > Nomi > > On Aug 15, 2013, at 2:44 PM, Thomas Brettin <brettin(a)mcs.anl.gov> wrote: > >> I'm beginning to think that the release team should be a team dedicated to releases. >> >> Thoughts anyone? >> >> Tom >> >> >> On Aug 13, 2013, at 2:57 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: >> >>> Here are my issue modules: >>> >>> Assembly - developers claims that fixes have been made but these have not >>> been retested. >>> Auth client and service - Not passing testing >>> Communities_api - minor problems with 3 commands (in scripts but not in >>> deployment). Mostly okay as is. >>> FBA modeling - failing due to workspace deployment problems >>> Functional ortholog predictor - COMMANDS file has been added since testing >>> but the command returns a non-zero value >>> ID Server - Issues with the command-line commands have been fixed since >>> testing. Needs new tag before deployment >>> Probabilistic Annotation - still failing testing >>> Communities QC - still failing testing >>> SHOCK - never passed deployment - hence never tested >>> >>> Miriam >>> >>> On 8/13/13 3:41 PM, "Nomi L. Harris" <nlharris(a)lbl.gov> wrote: >>> >>>> I'm at lunch but Mike is the tech doc lead. Feel free to have the meeting >>>> without me. I pretty much said my piece in my email last night. >>>> Nomi >>>> >>>> Sent from my iPhone >>>> >>>> On Aug 13, 2013, at 12:26 PM, Dan Olson <dolson(a)mcs.anl.gov> wrote: >>>> >>>>> Ok.. I primarily wanted to make go over the outstanding issues. The >>>>> cleared for production >>>>> column is fairly empty. >>>>> >>>>> Nomi, when you get back, can you have a look. I think some may have >>>>> been waiting on API doc checks? >>>>> >>>>> ----- Original Message ----- >>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>> To: "Dan Olson" <dolson(a)mcs.anl.gov>, release-team(a)kbase.us >>>>>> Sent: Tuesday, August 13, 2013 2:23:58 PM >>>>>> Subject: Re: [Release-team] Release Team Telecon >>>>>> >>>>>> Nomi went to lunch. >>>>>> >>>>>> >>>>>> On 8/13/13 3:22 PM, "Dan Olson" <dolson(a)mcs.anl.gov> wrote: >>>>>> >>>>>>> Hi all, >>>>>>> >>>>>>> I apologize, I had a meeting that backed up to this that ran long.. >>>>>>> >>>>>>> Can we regroup? >>>>>>> >>>>>>> ----- Original Message ----- >>>>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>>>> To: brettin(a)mcs.anl.gov, "Dan Olson" <dolson(a)mcs.anl.gov> >>>>>>>> Sent: Tuesday, August 13, 2013 2:04:00 PM >>>>>>>> Subject: Re: Release Team Telecon >>>>>>>> >>>>>>>> Who is leading this meeting? >>>>>>>> >>>>>>>> Nomi, Mike, and Miriam are in attendance. >>>>>>>> >>>>>>>> From: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>>>> When: 3:00 PM - 3:45 PM August 13, 2013 >>>>>>>> Subject: Release Team Telecon >>>>>>>> Location: 888-850-4523, passcode: 416791, leader passcode (Dan >>>>>>>> only) >>>>>>>> 4167913 >>>>>>>> >>>>>>>> >>>>>>>> The following is a new meeting request: >>>>>>>> Subject: Release Team Telecon >>>>>>>> Organizer: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>>>> Sent By: "India S. Gordon" >>>>>>>> <igordon(a)cels.anl.gov<mailto:[email protected]>> >>>>>>>> Location: 888-850-4523, passcode: 416791, leader passcode >>>>>>>> (Dan >>>>>>>> only) 4167913 >>>>>>>> Time: Tuesday, August 13, 2013, 2:00:00 PM - 2:45:00 PM GMT >>>>>>>> -06:00 >>>>>>>> US/Canada Central >>>>>>>> Invitees: >>>>>>>> release-team(a)kbase.us<mailto:[email protected]> >>>>>>>> *~*~*~*~*~*~*~*~*~* >>>>>>> _

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Re: [Release-team] Release Team Telecon
by Shane Canon 17 Aug '13

17 Aug '13

Miriam, Shock is deployed now. It still has one minor fix that is required, but we can work through those during deployment. --Shane On Aug 13, 2013, at 12:57 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > Here are my issue modules: > > Assembly - developers claims that fixes have been made but these have not > been retested. > Auth client and service - Not passing testing > Communities_api - minor problems with 3 commands (in scripts but not in > deployment). Mostly okay as is. > FBA modeling - failing due to workspace deployment problems > Functional ortholog predictor - COMMANDS file has been added since testing > but the command returns a non-zero value > ID Server - Issues with the command-line commands have been fixed since > testing. Needs new tag before deployment > Probabilistic Annotation - still failing testing > Communities QC - still failing testing > SHOCK - never passed deployment - hence never tested > > Miriam > > On 8/13/13 3:41 PM, "Nomi L. Harris" <nlharris(a)lbl.gov> wrote: > >> I'm at lunch but Mike is the tech doc lead. Feel free to have the meeting >> without me. I pretty much said my piece in my email last night. >> Nomi >> >> Sent from my iPhone >> >> On Aug 13, 2013, at 12:26 PM, Dan Olson <dolson(a)mcs.anl.gov> wrote: >> >>> Ok.. I primarily wanted to make go over the outstanding issues. The >>> cleared for production >>> column is fairly empty. >>> >>> Nomi, when you get back, can you have a look. I think some may have >>> been waiting on API doc checks? >>> >>> ----- Original Message ----- >>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>> To: "Dan Olson" <dolson(a)mcs.anl.gov>, release-team(a)kbase.us >>>> Sent: Tuesday, August 13, 2013 2:23:58 PM >>>> Subject: Re: [Release-team] Release Team Telecon >>>> >>>> Nomi went to lunch. >>>> >>>> >>>> On 8/13/13 3:22 PM, "Dan Olson" <dolson(a)mcs.anl.gov> wrote: >>>> >>>>> Hi all, >>>>> >>>>> I apologize, I had a meeting that backed up to this that ran long.. >>>>> >>>>> Can we regroup? >>>>> >>>>> ----- Original Message ----- >>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>> To: brettin(a)mcs.anl.gov, "Dan Olson" <dolson(a)mcs.anl.gov> >>>>>> Sent: Tuesday, August 13, 2013 2:04:00 PM >>>>>> Subject: Re: Release Team Telecon >>>>>> >>>>>> Who is leading this meeting? >>>>>> >>>>>> Nomi, Mike, and Miriam are in attendance. >>>>>> >>>>>> From: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>> When: 3:00 PM - 3:45 PM August 13, 2013 >>>>>> Subject: Release Team Telecon >>>>>> Location: 888-850-4523, passcode: 416791, leader passcode (Dan >>>>>> only) >>>>>> 4167913 >>>>>> >>>>>> >>>>>> The following is a new meeting request: >>>>>> Subject: Release Team Telecon >>>>>> Organizer: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>> Sent By: "India S. Gordon" >>>>>> <igordon(a)cels.anl.gov<mailto:[email protected]>> >>>>>> Location: 888-850-4523, passcode: 416791, leader passcode >>>>>> (Dan >>>>>> only) 4167913 >>>>>> Time: Tuesday, August 13, 2013, 2:00:00 PM - 2:45:00 PM GMT >>>>>> -06:00 >>>>>> US/Canada Central >>>>>> Invitees: >>>>>> release-team(a)kbase.us<mailto:[email protected]> >>>>>> *~*~*~*~*~*~*~*~*~* >>>>> _______________________________________________ >>>>> Release-team mailing list >>>>> Release-team(a)lists.kbase.us >>>>> https://lists.kbase.us/mailman/listinfo/release-team >>> _______________________________________________ >>> Release-team mailing list >>> Release-team(a)lists.kbase.us >>> https://lists.kbase.us/mailman/listinfo/release-team > > _______________________________________________ > Release-team mailing list > Release-team(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/release-team

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Re: [Release-team] Release Team Telecon
by Nomi Harris 16 Aug '13

16 Aug '13

In an ideal world, if we had the person-time available, then sure. As it is, I'm not sure who would take on the other responsibilities of the people who are working on releases AND other things (e.g., Dan, Shane, Mike). (I view Miriam as already fully committed to the release team--thank goodness for that!) Nomi On Aug 15, 2013, at 2:44 PM, Thomas Brettin <brettin(a)mcs.anl.gov> wrote: > I'm beginning to think that the release team should be a team dedicated to releases. > > Thoughts anyone? > > Tom > > > On Aug 13, 2013, at 2:57 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > >> Here are my issue modules: >> >> Assembly - developers claims that fixes have been made but these have not >> been retested. >> Auth client and service - Not passing testing >> Communities_api - minor problems with 3 commands (in scripts but not in >> deployment). Mostly okay as is. >> FBA modeling - failing due to workspace deployment problems >> Functional ortholog predictor - COMMANDS file has been added since testing >> but the command returns a non-zero value >> ID Server - Issues with the command-line commands have been fixed since >> testing. Needs new tag before deployment >> Probabilistic Annotation - still failing testing >> Communities QC - still failing testing >> SHOCK - never passed deployment - hence never tested >> >> Miriam >> >> On 8/13/13 3:41 PM, "Nomi L. Harris" <nlharris(a)lbl.gov> wrote: >> >>> I'm at lunch but Mike is the tech doc lead. Feel free to have the meeting >>> without me. I pretty much said my piece in my email last night. >>> Nomi >>> >>> Sent from my iPhone >>> >>> On Aug 13, 2013, at 12:26 PM, Dan Olson <dolson(a)mcs.anl.gov> wrote: >>> >>>> Ok.. I primarily wanted to make go over the outstanding issues. The >>>> cleared for production >>>> column is fairly empty. >>>> >>>> Nomi, when you get back, can you have a look. I think some may have >>>> been waiting on API doc checks? >>>> >>>> ----- Original Message ----- >>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>> To: "Dan Olson" <dolson(a)mcs.anl.gov>, release-team(a)kbase.us >>>>> Sent: Tuesday, August 13, 2013 2:23:58 PM >>>>> Subject: Re: [Release-team] Release Team Telecon >>>>> >>>>> Nomi went to lunch. >>>>> >>>>> >>>>> On 8/13/13 3:22 PM, "Dan Olson" <dolson(a)mcs.anl.gov> wrote: >>>>> >>>>>> Hi all, >>>>>> >>>>>> I apologize, I had a meeting that backed up to this that ran long.. >>>>>> >>>>>> Can we regroup? >>>>>> >>>>>> ----- Original Message ----- >>>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>>> To: brettin(a)mcs.anl.gov, "Dan Olson" <dolson(a)mcs.anl.gov> >>>>>>> Sent: Tuesday, August 13, 2013 2:04:00 PM >>>>>>> Subject: Re: Release Team Telecon >>>>>>> >>>>>>> Who is leading this meeting? >>>>>>> >>>>>>> Nomi, Mike, and Miriam are in attendance. >>>>>>> >>>>>>> From: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>>> When: 3:00 PM - 3:45 PM August 13, 2013 >>>>>>> Subject: Release Team Telecon >>>>>>> Location: 888-850-4523, passcode: 416791, leader passcode (Dan >>>>>>> only) >>>>>>> 4167913 >>>>>>> >>>>>>> >>>>>>> The following is a new meeting request: >>>>>>> Subject: Release Team Telecon >>>>>>> Organizer: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>>> Sent By: "India S. Gordon" >>>>>>> <igordon(a)cels.anl.gov<mailto:[email protected]>> >>>>>>> Location: 888-850-4523, passcode: 416791, leader passcode >>>>>>> (Dan >>>>>>> only) 4167913 >>>>>>> Time: Tuesday, August 13, 2013, 2:00:00 PM - 2:45:00 PM GMT >>>>>>> -06:00 >>>>>>> US/Canada Central >>>>>>> Invitees: >>>>>>> release-team(a)kbase.us<mailto:[email protected]> >>>>>>> *~*~*~*~*~*~*~*~*~* >>>>>> _

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Re: [Release-team] Release Team Telecon
by Thomas Brettin 15 Aug '13

15 Aug '13

I'm beginning to think that the release team should be a team dedicated to releases. Thoughts anyone? Tom On Aug 13, 2013, at 2:57 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > Here are my issue modules: > > Assembly - developers claims that fixes have been made but these have not > been retested. > Auth client and service - Not passing testing > Communities_api - minor problems with 3 commands (in scripts but not in > deployment). Mostly okay as is. > FBA modeling - failing due to workspace deployment problems > Functional ortholog predictor - COMMANDS file has been added since testing > but the command returns a non-zero value > ID Server - Issues with the command-line commands have been fixed since > testing. Needs new tag before deployment > Probabilistic Annotation - still failing testing > Communities QC - still failing testing > SHOCK - never passed deployment - hence never tested > > Miriam > > On 8/13/13 3:41 PM, "Nomi L. Harris" <nlharris(a)lbl.gov> wrote: > >> I'm at lunch but Mike is the tech doc lead. Feel free to have the meeting >> without me. I pretty much said my piece in my email last night. >> Nomi >> >> Sent from my iPhone >> >> On Aug 13, 2013, at 12:26 PM, Dan Olson <dolson(a)mcs.anl.gov> wrote: >> >>> Ok.. I primarily wanted to make go over the outstanding issues. The >>> cleared for production >>> column is fairly empty. >>> >>> Nomi, when you get back, can you have a look. I think some may have >>> been waiting on API doc checks? >>> >>> ----- Original Message ----- >>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>> To: "Dan Olson" <dolson(a)mcs.anl.gov>, release-team(a)kbase.us >>>> Sent: Tuesday, August 13, 2013 2:23:58 PM >>>> Subject: Re: [Release-team] Release Team Telecon >>>> >>>> Nomi went to lunch. >>>> >>>> >>>> On 8/13/13 3:22 PM, "Dan Olson" <dolson(a)mcs.anl.gov> wrote: >>>> >>>>> Hi all, >>>>> >>>>> I apologize, I had a meeting that backed up to this that ran long.. >>>>> >>>>> Can we regroup? >>>>> >>>>> ----- Original Message ----- >>>>>> From: "Miriam L. Land" <landml(a)ornl.gov> >>>>>> To: brettin(a)mcs.anl.gov, "Dan Olson" <dolson(a)mcs.anl.gov> >>>>>> Sent: Tuesday, August 13, 2013 2:04:00 PM >>>>>> Subject: Re: Release Team Telecon >>>>>> >>>>>> Who is leading this meeting? >>>>>> >>>>>> Nomi, Mike, and Miriam are in attendance. >>>>>> >>>>>> From: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>> When: 3:00 PM - 3:45 PM August 13, 2013 >>>>>> Subject: Release Team Telecon >>>>>> Location: 888-850-4523, passcode: 416791, leader passcode (Dan >>>>>> only) >>>>>> 4167913 >>>>>> >>>>>> >>>>>> The following is a new meeting request: >>>>>> Subject: Release Team Telecon >>>>>> Organizer: brettin(a)mcs.anl.gov<mailto:[email protected]> >>>>>> Sent By: "India S. Gordon" >>>>>> <igordon(a)cels.anl.gov<mailto:[email protected]>> >>>>>> Location: 888-850-4523, passcode: 416791, leader passcode >>>>>> (Dan >>>>>> only) 4167913 >>>>>> Time: Tuesday, August 13, 2013, 2:00:00 PM - 2:45:00 PM GMT >>>>>> -06:00 >>>>>> US/Canada Central >>>>>> Invitees: >>>>>> release-team(a)kbase.us<mailto:[email protected]> >>>>>> *~*~*~*~*~*~*~*~*~* >>>>> _______________________________________________ >>>>> Release-team mailing list >>>>> Release-team(a)lists.kbase.us >>>>> https://lists.kbase.us/mailman/listinfo/release-team >>> _______________________________________________ >>> Release-team mailing list >>> Release-team(a)lists.kbase.us >>> https://lists.kbase.us/mailman/listinfo/release-team > > _______________________________________________ > Release-team mailing list > Release-team(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/release-team

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Re: [Release-team] Build next week?
by Thomas Brettin 15 Aug '13

15 Aug '13

What production services have been updated? On Aug 15, 2013, at 2:00 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > Tom, > > This is what I have gathered from the spreadsheet: > > Annotation - no issues - > > Assembly - developer has fixed problems but need new deploy in order to > test. Command line scripts fixed but not in tagged version. No obvious > API doc. > > Auth Client - New version was tagged, deployed, and tested this week. > Problems with command line scripts fixed in latest tagged version. > Documentation and release notes okay. > > Authorization Service - failed testing last week and no dialog about a > fix. No release notes but it is internal. > > Central Store - no issues > > Cluster Service - no issues > > Communities_API - errors with 3 of the command-line commands and > documentation review found two different files (communitiesAPI.html and > CommunitiesAPI.html) > > Expression Service - no issues > > FBA modeling - failed due to problems with workspace/typecomp > > Functional Ortholog Predictor - Has minor changes to the COMMANDS file and > command-line script that are not in the latest tagged version. Otherwise, > no issues. > > ID Server - - Has minor changes to the command-line scripts that are not > in the latest tagged version. Otherwise, no issues. > > matR - Fails the documentation QC > > Phispy - no issues > > Plant expression - no issues > > Probabilistic annotation - has not passed testing. Scripts, > documentation, and release notes okay. > > Protein Info service - no issues > > QC - failed testing, has command-line issues, and failed documentation qc > > Registry - does not have release notes but is internal. No other issues. > > SHOCK service - I've seen email from Shane that it is now deployed. How > not been tested or had a documentation review. > > Search - customized deploy passed testing. Failed documentation review. > > Similarity Search - no issues > > Tree Service - no issues > > Workspace service - has issues related to new type compiler. > > > SUMMARY - > > Clearly ready - Annotation, auth client, central store, cluster service, > expression, functional ortholog predictor, idserver, phispy, plant > expression, protein info service, registry, similarity service, tree > service > > Not Ready - authorization service, FBA modeling, probabilistic annotation, > communities_qc, shock, search, workspace service > > Close (judgement call) - assembly, communities_API, matR > > > Miriam > > On 8/15/13 2:11 PM, "Thomas Brettin" <brettin(a)mcs.anl.gov> wrote: > >> No, I think it's to soon. >> >> Who can give me an update on the current ongoing major build. >> >> Tom >> >> >> On Aug 15, 2013, at 12:16 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: >> >>> Tom, >>> >>> Will we be having a mini build next week? >>> >>> Miriam >>> _______________________________________________ >>> Release-team mailing list >>> Release-team(a)lists.kbase.us >>> https://lists.kbase.us/mailman/listinfo/release-team >> >

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Re: [Release-team] Build next week?
by Land, Miriam L. 15 Aug '13

15 Aug '13

Tom, This is what I have gathered from the spreadsheet: Annotation - no issues - Assembly - developer has fixed problems but need new deploy in order to test. Command line scripts fixed but not in tagged version. No obvious API doc. Auth Client - New version was tagged, deployed, and tested this week. Problems with command line scripts fixed in latest tagged version. Documentation and release notes okay. Authorization Service - failed testing last week and no dialog about a fix. No release notes but it is internal. Central Store - no issues Cluster Service - no issues Communities_API - errors with 3 of the command-line commands and documentation review found two different files (communitiesAPI.html and CommunitiesAPI.html) Expression Service - no issues FBA modeling - failed due to problems with workspace/typecomp Functional Ortholog Predictor - Has minor changes to the COMMANDS file and command-line script that are not in the latest tagged version. Otherwise, no issues. ID Server - - Has minor changes to the command-line scripts that are not in the latest tagged version. Otherwise, no issues. matR - Fails the documentation QC Phispy - no issues Plant expression - no issues Probabilistic annotation - has not passed testing. Scripts, documentation, and release notes okay. Protein Info service - no issues QC - failed testing, has command-line issues, and failed documentation qc Registry - does not have release notes but is internal. No other issues. SHOCK service - I've seen email from Shane that it is now deployed. How not been tested or had a documentation review. Search - customized deploy passed testing. Failed documentation review. Similarity Search - no issues Tree Service - no issues Workspace service - has issues related to new type compiler. SUMMARY - Clearly ready - Annotation, auth client, central store, cluster service, expression, functional ortholog predictor, idserver, phispy, plant expression, protein info service, registry, similarity service, tree service Not Ready - authorization service, FBA modeling, probabilistic annotation, communities_qc, shock, search, workspace service Close (judgement call) - assembly, communities_API, matR Miriam On 8/15/13 2:11 PM, "Thomas Brettin" <brettin(a)mcs.anl.gov> wrote: >No, I think it's to soon. > >Who can give me an update on the current ongoing major build. > >Tom > > >On Aug 15, 2013, at 12:16 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > >> Tom, >> >> Will we be having a mini build next week? >> >> Miriam >> _______________________________________________ >> Release-team mailing list >> Release-team(a)lists.kbase.us >> https://lists.kbase.us/mailman/listinfo/release-team >

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Re: [Release-team] Build next week?
by Thomas Brettin 15 Aug '13

15 Aug '13

No, I think it's to soon. Who can give me an update on the current ongoing major build. Tom On Aug 15, 2013, at 12:16 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > Tom, > > Will we be having a mini build next week? > > Miriam > _______________________________________________ > Release-team mailing list > Release-team(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/release-team

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Build next week?
by Land, Miriam L. 15 Aug '13

15 Aug '13

Tom, Will we be having a mini build next week? Miriam

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FYI on updated bootstrap
by Robert Olson 14 Aug '13

14 Aug '13

I've pushed an initial set of changes for a CentOS 6.4 runtime build. (Our new SEED systems are running that OS and I want to base the SEED on the KB runtime...) --bob

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