Ok.. All of the modules in production were pulled on Jan 9th. The only modules that were updated beyond that were ones that failed testing - or had requests to repull. ---- Daniel Murphy-Olson Sr. Systems Administrator Computing, Environment and Life Sciences Division Argonne National Laboratory 630-252-0055<callto:630-252-0055> ________________________________ From: Olson, Robert D. Sent: Wednesday, February 12, 2014 2:59 PM To: Murphy-Olson, Daniel E. Cc: [email protected] Subject: Re: [Release-team] CDMI redeploy Looks like genome_annotation also didn’t get the latest pull. thneed:~ olson$ rast2-call-features-CDS-prodigal < buch.g > buch.f JSONRPC error: 'call_features_CDS_prodigal' is not a valid method in service GenomeAnnotation. JSONRPC error code: -32601 JSONRPC error data: On Feb 12, 2014, at 1:40 PM, Olson, Robert D. <[email protected]<mailto:[email protected]>> wrote: Yes, that was the latest push into git from upstream. ________________________________ From: Murphy-Olson, Daniel E. Sent: Wednesday, February 12, 2014 1:38 PM To: Olson, Robert D. Cc: [email protected]<mailto:[email protected]> Subject: RE: [Release-team] CDMI redeploy Sorry, git reference. I see this from last Thursday, ref 44365f26fa9a1cfeae5ef3b3c699c1643a050d32 which is what I bet you expected to find in production. commit 44365f26fa9a1cfeae5ef3b3c699c1643a050d32 Author: Robert Olson <[email protected]<mailto:[email protected]>> Date: Thu Feb 6 12:48:26 2014 -0600 Update to 1.074. diff --git a/lib/AlignTree.pm b/lib/AlignTree.pm index aca15a9..bc9e72e 100644 I assume we need to be running this version? ---- Daniel Murphy-Olson Sr. Systems Administrator Computing, Environment and Life Sciences Division Argonne National Laboratory 630-252-0055<callto:630-252-0055> ________________________________ From: Olson, Robert D. Sent: Wednesday, February 12, 2014 1:31 PM To: Murphy-Olson, Daniel E. Cc: [email protected]<mailto:[email protected]> Subject: RE: [Release-team] CDMI redeploy ref? ________________________________ From: Murphy-Olson, Daniel E. Sent: Wednesday, February 12, 2014 1:31 PM To: Olson, Robert D. Cc: [email protected]<mailto:[email protected]> Subject: RE: [Release-team] CDMI redeploy Can you tell me what ref has that, or should we just use master as of right now? ---- Daniel Murphy-Olson Sr. Systems Administrator Computing, Environment and Life Sciences Division Argonne National Laboratory 630-252-0055<callto:630-252-0055> ________________________________ From: Olson, Robert D. Sent: Wednesday, February 12, 2014 1:29 PM To: Murphy-Olson, Daniel E. Cc: [email protected]<mailto:[email protected]> Subject: Re: [Release-team] CDMI redeploy I don’t think that version has any of the support for the new ER model. On Feb 12, 2014, at 1:19 PM, Murphy-Olson, Daniel E. <[email protected]<mailto:[email protected]>> wrote: It has the version that went through test during the last release cycle, from Jan 9th. Do we need a newer version than that? ---- Daniel Murphy-Olson Sr. Systems Administrator Computing, Environment and Life Sciences Division Argonne National Laboratory 630-252-0055<callto:630-252-0055> ________________________________ From: [email protected]<mailto:[email protected]> [[email protected]<mailto:[email protected]>] on behalf of Robert Olson [[email protected]<mailto:[email protected]>] Sent: Wednesday, February 12, 2014 1:13 PM To: [email protected]<mailto:[email protected]> Subject: [Release-team] CDMI redeploy Did the central store service not get redeployed? I’m getting this with latest kb_seed client code: olson@maple:~$ echo 'fig|83333.1.peg.4' | source_ids_to_fids JSONRPC error: 'source_ids_to_fids' is not a valid method in service CDMI_API. JSONRPC error code: -32601 JSONRPC error data: Trace begun at /vol/kbase/deployment/lib/Bio/KBase/CDMI/Client.pm line 5967 Bio::KBase::CDMI::Client::source_ids_to_fids('Bio::KBase::CDMI::Client=HASH(0x4f44518)', 'ARRAY(0x4f82d98)') called at /vol/kbase/deployment/plbin/source_ids_to_fids.pl line 83 which looks like the service doesn’t have the new code in it. —bob _______________________________________________ Release-team mailing list [email protected]<mailto:[email protected]> https://lists.kbase.us/mailman/listinfo/release-team