Ok.. All of the modules in production were pulled on Jan 9th. 
The only modules that were updated beyond that were ones that failed testing - or had requests to repull.

----
Daniel Murphy-Olson      
Sr. Systems Administrator
Computing, Environment and Life Sciences Division
Argonne National Laboratory
630-252-0055
From: Olson, Robert D.
Sent: Wednesday, February 12, 2014 2:59 PM
To: Murphy-Olson, Daniel E.
Cc: release-team@kbase.us
Subject: Re: [Release-team] CDMI redeploy

Looks like genome_annotation also didn’t get the latest pull.

thneed:~ olson$ rast2-call-features-CDS-prodigal < buch.g > buch.f
JSONRPC error:
'call_features_CDS_prodigal' is not a valid method in service GenomeAnnotation.
JSONRPC error code: -32601
JSONRPC error data:


On Feb 12, 2014, at 1:40 PM, Olson, Robert D. <olson@mcs.anl.gov> wrote:

Yes, that was the latest push into git from upstream.
From: Murphy-Olson, Daniel E.
Sent: Wednesday, February 12, 2014 1:38 PM
To: Olson, Robert D.
Cc: release-team@kbase.us
Subject: RE: [Release-team] CDMI redeploy

Sorry, git reference.  I see this from last Thursday, ref 44365f26fa9a1cfeae5ef3b3c699c1643a050d32 which is what I bet you expected to find in production.

commit 44365f26fa9a1cfeae5ef3b3c699c1643a050d32
Author: Robert Olson <olson@mcs.anl.gov>
Date:   Thu Feb 6 12:48:26 2014 -0600

    Update to 1.074.

diff --git a/lib/AlignTree.pm b/lib/AlignTree.pm
index aca15a9..bc9e72e 100644

I assume we need to be running this version?

----
Daniel Murphy-Olson       
Sr. Systems Administrator
Computing, Environment and Life Sciences Division
Argonne National Laboratory
630-252-0055
From: Olson, Robert D.
Sent: Wednesday, February 12, 2014 1:31 PM
To: Murphy-Olson, Daniel E.
Cc: release-team@kbase.us
Subject: RE: [Release-team] CDMI redeploy

ref?

From: Murphy-Olson, Daniel E.
Sent: Wednesday, February 12, 2014 1:31 PM
To: Olson, Robert D.
Cc: release-team@kbase.us
Subject: RE: [Release-team] CDMI redeploy

Can you tell me what ref has that, or should we just use master as of right now?

----
Daniel Murphy-Olson       
Sr. Systems Administrator
Computing, Environment and Life Sciences Division
Argonne National Laboratory
630-252-0055
From: Olson, Robert D.
Sent: Wednesday, February 12, 2014 1:29 PM
To: Murphy-Olson, Daniel E.
Cc: release-team@kbase.us
Subject: Re: [Release-team] CDMI redeploy

I don’t think that version has any of the support for the new ER model.

On Feb 12, 2014, at 1:19 PM, Murphy-Olson, Daniel E. <dolson@mcs.anl.gov> wrote:

It has the version that went through test during the last release cycle, from Jan 9th.  
Do we need a newer version than that?

----
Daniel Murphy-Olson       
Sr. Systems Administrator
Computing, Environment and Life Sciences Division
Argonne National Laboratory
630-252-0055
From: release-team-bounces@lists.kbase.us [release-team-bounces@lists.kbase.us] on behalf of Robert Olson [olson@mcs.anl.gov]
Sent: Wednesday, February 12, 2014 1:13 PM
To: release-team@kbase.us
Subject: [Release-team] CDMI redeploy

Did the central store service not get redeployed? I’m getting this with latest kb_seed client code:

olson@maple:~$ echo 'fig|83333.1.peg.4' | source_ids_to_fids
JSONRPC error:
'source_ids_to_fids' is not a valid method in service CDMI_API.
JSONRPC error code: -32601
JSONRPC error data:


Trace begun at /vol/kbase/deployment/lib/Bio/KBase/CDMI/Client.pm line 5967
Bio::KBase::CDMI::Client::source_ids_to_fids('Bio::KBase::CDMI::Client=HASH(0x4f44518)', 'ARRAY(0x4f82d98)') called at /vol/kbase/deployment/plbin/source_ids_to_fids.pl line 83

which looks like the service doesn’t have the new code in it.

—bob

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