June 2013 - Release-team - mailman3.cels.anl.gov

Request iplant atmosphere accounts
by Dan Olson 05 Jun '13

05 Jun '13

I need some help testing out a KBase image that we uploaded to iplant atmosphere. Can the test team go and create accounts at http://user.iplantcollaborative.org/? Let me know when that is done, and I'll have the sysadmin there add you to our image's access list. ---- Daniel Murphy-Olson Systems Administrator Mathematics & Computer Science Division Argonne National Laboratory 630-252-0055

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Re: [Release-team] Which services (and Labs) are in this release?
by Shane Canon 03 Jun '13

03 Jun '13

I redeployed everything. There were a few services that hadn't changed, but it wasn't worth making an exception for those. --Shane On Jun 3, 2013, at 1:17 PM, Thomas Brettin <brettin(a)mcs.anl.gov> wrote: > Yes. > > But verifying with Shane would be good. I don't know if Shane deployed all of those, or only the ones that are used clients in IRIS > > Tom > On Jun 3, 2013, at 3:11 PM, Nomi Harris <nlharris(a)lbl.gov> wrote: > >> I'm looking at https://docs.google.com/a/lbl.gov/spreadsheet/ccc?key=0Ana5oznWypH2dFppaEJz… but it's a little hard to tell. Are the ones that are shaded gray or purple not in this release, and the rest are? >> Nomi >> >> _______________________________________________ >> Release-team mailing list >> Release-team(a)lists.kbase.us >> https://lists.kbase.us/mailman/listinfo/release-team >

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Re: [Release-team] Which services (and Labs) are in this release?
by Land, Miriam L. 03 Jun '13

03 Jun '13

I've had to do some updates to create a consistent answer. The colors were more informative in the deploy and test phase. We were making things that could be skipped. Grey was for labs and module dependencies that were not being tested directly. Purple now represents modules pulled from the release at the request of the developer. I believe that the "ubuntu image candidate" may be the best marker of what is in the release. Miriam On 6/3/13 4:14 PM, "Nomi Harris" <nlharris(a)lbl.gov> wrote: >Argh, I hate when lbl.gov does that. >The doc is just the Services spreadsheet (the May 2103 Major tab). > Nomi > >On Jun 3, 2013, at 1:12 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > >> Nomi, >> >> That link is for a LBNL doc. >> >> Miriam >> >> On 6/3/13 4:11 PM, "Nomi Harris" <nlharris(a)lbl.gov> wrote: >> >>> I'm looking at >>> >>>https://docs.google.com/a/lbl.gov/spreadsheet/ccc?key=0Ana5oznWypH2dFppa >>>EJ >>> zOUdfMV8zN0Y3Vm5YM095aWc#gid=22 but it's a little hard to tell. Are the >>> ones that are shaded gray or purple not in this release, and the rest >>>are? >>> Nomi >>> >>> _______________________________________________ >>> Release-team mailing list >>> Release-team(a)lists.kbase.us >>> https://lists.kbase.us/mailman/listinfo/release-team >> >

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Re: [Release-team] Which services (and Labs) are in this release?
by Thomas Brettin 03 Jun '13

03 Jun '13

Yes. But verifying with Shane would be good. I don't know if Shane deployed all of those, or only the ones that are used clients in IRIS Tom On Jun 3, 2013, at 3:11 PM, Nomi Harris <nlharris(a)lbl.gov> wrote: > I'm looking at https://docs.google.com/a/lbl.gov/spreadsheet/ccc?key=0Ana5oznWypH2dFppaEJz… but it's a little hard to tell. Are the ones that are shaded gray or purple not in this release, and the rest are? > Nomi > > _______________________________________________ > Release-team mailing list > Release-team(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/release-team

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Re: [Release-team] Which services (and Labs) are in this release?
by Nomi Harris 03 Jun '13

03 Jun '13

Argh, I hate when lbl.gov does that. The doc is just the Services spreadsheet (the May 2103 Major tab). Nomi On Jun 3, 2013, at 1:12 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: > Nomi, > > That link is for a LBNL doc. > > Miriam > > On 6/3/13 4:11 PM, "Nomi Harris" <nlharris(a)lbl.gov> wrote: > >> I'm looking at >> https://docs.google.com/a/lbl.gov/spreadsheet/ccc?key=0Ana5oznWypH2dFppaEJ >> zOUdfMV8zN0Y3Vm5YM095aWc#gid=22 but it's a little hard to tell. Are the >> ones that are shaded gray or purple not in this release, and the rest are? >> Nomi >> >> _______________________________________________ >> Release-team mailing list >> Release-team(a)lists.kbase.us >> https://lists.kbase.us/mailman/listinfo/release-team >

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Which services (and Labs) are in this release?
by Nomi Harris 03 Jun '13

03 Jun '13

I'm looking at https://docs.google.com/a/lbl.gov/spreadsheet/ccc?key=0Ana5oznWypH2dFppaEJz… but it's a little hard to tell. Are the ones that are shaded gray or purple not in this release, and the rest are? Nomi

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Re: [Release-team] meeting today?
by Michael Sneddon 03 Jun '13

03 Jun '13

thanks, I had to recall but I'm back On Mon, Jun 3, 2013 at 9:10 AM, Michael Sneddon <mwsneddon(a)lbl.gov> wrote: > are people still there? I seem to have fallen off, and the line is > silent... > > > On Mon, Jun 3, 2013 at 9:02 AM, Dan Olson <dolson(a)mcs.anl.gov> wrote: > >> Are we still meeting today? I think I'm the only one on the call. >> >> ---- >> Daniel Murphy-Olson >> Systems Administrator >> Mathematics & Computer Science Division >> Argonne National Laboratory >> 630-252-0055 >> >> _______________________________________________ >> Release-team mailing list >> Release-team(a)lists.kbase.us >> https://lists.kbase.us/mailman/listinfo/release-team >> > >

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FW: latest DMG, version 2
by Land, Miriam L. 03 Jun '13

03 Jun '13

On 5/24/13 5:57 PM, "Land, Miriam L." <landml(a)ornl.gov> wrote: >My latest tests. > >Miriam > >On 5/24/13 5:03 PM, "Robert Olson" <olson(a)mcs.anl.gov> wrote: > >>Available at >> >>http://bioseed.mcs.anl.gov/~olson/20130522-prod-dmg-2.dmg >> >>This includes a tweak (not yet committed) to the KBaseFBAModeling >>makefile to make it use the macros from Makefile.common.rules for doing >>script deployments; this fixes the wrapper script generation to work >>properly on the mac. >> >>It occurs to me that I didn't make the corresponding change to the other >>modeling related makefiles; what needs to happen is a check for >>"wrap_perl" in Makefiles - that wrapper should not be referenced that >>way, but use the makefile variable WRAP_PERL_TOOL (or WRAP_PYTHON_TOOL >>for python wrappers), since the mac build needs to deploy differently. >>See common/Mkaefile.common.rules for examples or just include that (see >>kb_seed makefile as an example of a module that does that). >> >>--bob >

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Re: [Release-team] meeting today?
by Michael Sneddon 03 Jun '13

03 Jun '13

are people still there? I seem to have fallen off, and the line is silent... On Mon, Jun 3, 2013 at 9:02 AM, Dan Olson <dolson(a)mcs.anl.gov> wrote: > Are we still meeting today? I think I'm the only one on the call. > > ---- > Daniel Murphy-Olson > Systems Administrator > Mathematics & Computer Science Division > Argonne National Laboratory > 630-252-0055 > > _______________________________________________ > Release-team mailing list > Release-team(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/release-team >

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Re: [Release-team] meeting today?
by India Gordon 03 Jun '13

03 Jun '13

I think Tom's calling in right now, Dan. His last call ran over a few minutes. On Jun 3, 2013, at 11:02 AM, Dan Olson <dolson(a)mcs.anl.gov> wrote: Are we still meeting today? I think I'm the only one on the call. ---- Daniel Murphy-Olson Systems Administrator Mathematics & Computer Science Division Argonne National Laboratory 630-252-0055 _______________________________________________ Release-team mailing list Release-team(a)lists.kbase.us https://lists.kbase.us/mailman/listinfo/release-team India S. Gordon Administrative Secretary Computing, Environment and Life Sciences Argonne National Laboratory 9700 S. Cass Avenue Argonne, IL 60439 Phone: 630-252-4336

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