Release Team,
From the spreadsheet, here is what I see as the status:
Assembly – had git commits on Jan. 27 and 28 – I assume it is ready for deploy/test KBase FBA modeling – Had a commit yesterday – I assume it is ready for deploy/test gene_conservation – had commits on Jan. 31 – I assume it is ready for deploy/test genome_annotation – had commits on Jan. 31 – I assume it is ready for deploy/test Meme, inferelator, cmonkey – deployed and tested over the weekend. Ready for documentation testing Search – has been tested over the weekend and problems appear to be with configuration, not the code kb_seed/Central Store – we have commitment that it will be updated today based on new database structure Expression, Network, MAK, and bambi have asked for an extension to Tuesday sometime on the west coast. Are we prepared to act on the consequences of delayed modules without contingency plans? Tom, are there any waivers? Miriam From: <Land>, Miriam Land <[email protected]<mailto:[email protected]>> Date: Friday, January 31, 2014 10:23 AM To: KBase-devel <[email protected]<mailto:[email protected]>> Subject: [Kbase-devel] KBase Module status as of Jan. 31, 2014 - Deadline is near All, DROP DEAD DAY APPROACHES – All modules must be checked into git by 8am Eastern time Monday Feb. 3. Updates since yesterday – * id_map was unit tested had passed documentation review * AWE, Shock, and workspace_deluxe have had independent testing and no longer need black box testing. * Search is in deploy and test on the test VM As always, I welcome corrections and updates to the information below. ---------------------------------------------------------------------------------------------------------------------------- Modules expecting to update after Jan. 27 * Assembly - implementing an option for integration with the narratives. Expect completion by Feb. 3. * id_map * KBase Expression – needs DB connection and config updates * gene_conservation has end-of-month target * IRIS – What is in testing is already in production. There may be a new version before Feb. 3. * KB_seed update will be necessary if production access to the new database schema is required * Networks dependent on data load and has end-of-month target * Modeling will have a HUGE update by Thurs. (Jan. 30) Modules with a submitted contingency plan * Search Modules ready for production deployment * Authentication and Authorization Client * CBD and Probabilistic Annotation - will need black box testing at some point * Communities API – passed tests except for two that need to be withdrawn (Andreas and Travis) * Genotyping Service * Handle Service (on t6) - internal service - will need black box testing at some point * Interlog projection - will need black box testing at some point * m5nr - (Andreas and Travis) - also will need black box testing at some point * Workspace_deluxe – * Awe Service – internal service * Shock Service – internal service Modules ready to deploy to testing VM * genome_annotation – (Bob O. 1/30) Modules currently in testing * Search – (Matt Henderson 1/27) Modules ready for review of scripts, documentation, and release notes * none Modules needing updates to release notes * KBase Expression Services * Network service * AWE and Shock – release notes desirable but not mandatory * All modules that haven't been tested yet Modules waiting on database updates * FBA modeling - transitioning to the new workspace (Chris H.) * KBase Expression – need DB connection and config updates afterwards (confirmed 1/27) (Jason) Modules waiting on a developer * Assembly - option for the narrative will be added * Bambi, Cmonkey, inferelator, meme and possibly MAK will be ready 1/28 * Gene conservation – development continuing (end of month confirmed 1/22) (Gang Fang) - will need black box testing at some point * kb_seed – update to new database schema (Bob O. 1/27) * Networks - development continuing and data load dependency, by Jan. 31 (confirmed 1/22) (Pavel) Modules Withdrawn from the formal build process * Functional Ortholog Predictor – delay until after Feb. demo (1/23/14 Fei He) * Landing Pages (Parmvir) - Will not be part of this build cycle (S. Chan 1/23/14) * Narrative (Steve Chan) - Will not be part of this build cycle (S. Chan 1/23/14) Miriam _______________________________________________ Kbase-devel mailing list [email protected]<mailto:[email protected]> https://lists.kbase.us/mailman/listinfo/kbase-devel