- Microbe - mailman3.cels.anl.gov

Re: [Microbe] boolean growth server running
by Gavin Price 05 Jun '12

05 Jun '12

I just switched from the django server to nginx and fastcgi, and as a consequence the service docs link is now: http://140.221.92.10/services/booleangrowth/api/v1/docs -g On 5/19/2012 10:51 PM, Gavin A Price wrote: > Hi all, > > I have a basic version of the boolean growth service running on > Magellan. I'm hoping to get some feedback on the direction I'm going > and the features I have, as well as what I'm planning. > > First rule: Do not share this link outside KBase. The server is > running on the Django test server which is not production worthy. > Also, the server makes parts of the Microbes Online fitness database > visible to the world, and that data is private. That being said, Keith > has blessed me running the server as is, so I take no responsibility > whatsoever for the disaster that will undoubtedly happen (hi Keith!). > > Some rudimentary documentation is here: > http://140.221.92.10:8000/booleangrowth/api/v1/docs > > I recommend you read it and the Tastypie link before you interact with > the server. There are also some development notes linked that include > my to do list and some musings on how to make the service better. > Finally, there's a link to the entry point of the server. > > Any feedback regarding bugs, requested features, the direction I'm > planning, etc. are welcomed and, indeed, strongly encouraged. I don't > want to to write a bunch of code and then find out no one wants to use > it. > > Thanks, Gavin

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Re: [Microbe] KBase Microbes conference call this week?
by Steven E. Brenner 05 Jun '12

05 Jun '12

Sorry I couldn't join -- I was traveling. I would have given advance notice but didn't know it was happening. On Mon, 4 Jun 2012, Paramvir Dehal wrote: > Sorry I haven't sent out an agenda. The meeting is in 20min, maybe > we'll keep it short. > > 866-740-1260 Code: 4958182 > > Paramvir > > On Mon, Jun 4, 2012 at 10:35 AM, Gavin A Price <gavinaprice(a)gmail.com> wrote: >> It's on my calendar but I haven't seen a conference call #, so not sure if >> it's happening. >> >> -g >> _______________________________________________ >> Microbe mailing list >> Microbe(a)lists.kbase.us >> https://lists.kbase.us/mailman/listinfo/microbe > _______________________________________________ > Microbe mailing list > Microbe(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/microbe >

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Re: [Microbe] KBase Microbes conference call this week?
by Paramvir Dehal 04 Jun '12

04 Jun '12

Sorry I haven't sent out an agenda. The meeting is in 20min, maybe we'll keep it short. 866-740-1260 Code: 4958182 Paramvir On Mon, Jun 4, 2012 at 10:35 AM, Gavin A Price <gavinaprice(a)gmail.com> wrote: > It's on my calendar but I haven't seen a conference call #, so not sure if > it's happening. > > -g > _______________________________________________ > Microbe mailing list > Microbe(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/microbe

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KBase Microbes conference call this week?
by Gavin A Price 04 Jun '12

04 Jun '12

It's on my calendar but I haven't seen a conference call #, so not sure if it's happening. -g

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Re: [Microbe] unable to call in for today's call
by Adam Paul Arkin 21 May '12

21 May '12

yup= sorry there was an enigma microbes call at 10. A From: <gaprice(a)lbl.gov> Date: Mon, 21 May 2012 15:02:30 -0700 To: <microbe(a)lists.kbase.us> Subject: Re: [Microbe] unable to call in for today's call > > Maybe Adam is referring to a different conference call? The Microbes call is > always at 11. > > -g > > On 5/21/2012 2:45 PM, Steven E. Brenner wrote: >> At 10? >> >> I caught the eclipse at the Lawrence Hall of Science with my daughter. Crazy >> crowded. >> >> On Mon, 21 May 2012, Adam Paul Arkin wrote: >> >> >>> Yes at 10! >>> A >>> >>> From: Pavel Novichkov <psnovichkov(a)lbl.gov> <mailto:[email protected]> >>> Date: Mon, 21 May 2012 11:12:49 -0700 >>> To: John-Marc Chandonia <JMChandonia(a)lbl.gov> <mailto:[email protected]> >>> Cc: Ben Bowen <bpbowen(a)lbl.gov> <mailto:[email protected]> , KBase Microbes >>> List <Microbe(a)lists.kbase.us> <mailto:[email protected]> >>> Subject: Re: [Microbe] unable to call in for today's call >>> >>> Paramvir, Chris, >>> >>> I am online too... >>> Do we have con call today? >>> P. >>> >>> On Monday, May 21, 2012, John-Marc Chandonia <JMChandonia(a)lbl.gov> >>> <mailto:[email protected]> wrote: >>>> > On Mon, May 21, 2012 at 09:01:19AM -0700, Ben Bowen wrote: >>>>> >> I'm at a conference most of this week, and will miss today's >>>>> call. Did >>>>> >> anyone see the eclipse yesterday? Vancouver was smothered in >>>>> heavy fog, >>>>> >> and I think it only darkened by a bit during the eclipse. >>>> > >>>> > I'm online, waiting for a chairperson to start the call. >>>> > >>>> > Yesterday, I drove up to Chico to catch the eclipse--it was fun to >>>> > watch with a crowd of astronomy nerds. >>>> > >>>> > JMC >>>> > -- >>>> > John-Marc Chandonia (JMChandonia(a)lbl.gov) We're >>>> everywhere... >>>> > Physical Biosciences Division, Berkeley National Lab for your >>>> convenience. >>>> > http://www.strgen.org/~jmc/ -- Psi >>>> Corps <*> >>>> > _______________________________________________ Microbe mailing >>>> list Microbe(a)lists.kbase.us >>> https://lists.kbase.us/mailman/listinfo/microbe >>> >>> >>> >>> >> >> >> >> _______________________________________________ >> Microbe mailing list >> [email protected]://lists.kbase.us/mailman/listinfo/microbe >> > > _______________________________________________ Microbe mailing list > Microbe(a)lists.kbase.us https://lists.kbase.us/mailman/listinfo/microbe

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Re: [Microbe] unable to call in for today's call
by gaprice＠lbl.gov 21 May '12

21 May '12

Maybe Adam is referring to a different conference call? The Microbes call is always at 11. -g On 5/21/2012 2:45 PM, Steven E. Brenner wrote: > At 10? > > I caught the eclipse at the Lawrence Hall of Science with my daughter. > Crazy crowded. > > On Mon, 21 May 2012, Adam Paul Arkin wrote: > >> Yes--- at 10! >> A >> >> From: Pavel Novichkov <psnovichkov(a)lbl.gov> >> Date: Mon, 21 May 2012 11:12:49 -0700 >> To: John-Marc Chandonia <JMChandonia(a)lbl.gov> >> Cc: Ben Bowen <bpbowen(a)lbl.gov>, KBase Microbes List >> <Microbe(a)lists.kbase.us> >> Subject: Re: [Microbe] unable to call in for today's call >> >> Paramvir, Chris, >> >> I am online too... >> Do we have con call today? >> P. >> >> On Monday, May 21, 2012, John-Marc Chandonia >> <JMChandonia(a)lbl.gov> wrote: >> > On Mon, May 21, 2012 at 09:01:19AM -0700, Ben Bowen wrote: >> >> I'm at a conference most of this week, and will miss today's call. >> Did >> >> anyone see the eclipse yesterday? Vancouver was smothered in >> heavy fog, >> >> and I think it only darkened by a bit during the eclipse. >> > >> > I'm online, waiting for a chairperson to start the call. >> > >> > Yesterday, I drove up to Chico to catch the eclipse--it was fun to >> > watch with a crowd of astronomy nerds. >> > >> > JMC >> > -- >> > John-Marc Chandonia (JMChandonia(a)lbl.gov) We're >> everywhere... >> > Physical Biosciences Division, Berkeley National Lab for your >> convenience. >> > http://www.strgen.org/~jmc/ -- Psi >> Corps <*> >> > _______________________________________________ Microbe mailing >> list Microbe(a)lists.kbase.us >> https://lists.kbase.us/mailman/listinfo/microbe >> >> >> > > > _______________________________________________ > Microbe mailing list > Microbe(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/microbe

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Re: [Microbe] unable to call in for today's call
by Steven E. Brenner 21 May '12

21 May '12

At 10? I caught the eclipse at the Lawrence Hall of Science with my daughter. Crazy crowded. On Mon, 21 May 2012, Adam Paul Arkin wrote: > Yes— at 10! > A > > From: Pavel Novichkov <psnovichkov(a)lbl.gov> > Date: Mon, 21 May 2012 11:12:49 -0700 > To: John-Marc Chandonia <JMChandonia(a)lbl.gov> > Cc: Ben Bowen <bpbowen(a)lbl.gov>, KBase Microbes List <Microbe(a)lists.kbase.us> > Subject: Re: [Microbe] unable to call in for today's call > > Paramvir, Chris, > > I am online too... > Do we have con call today? > P. > > On Monday, May 21, 2012, John-Marc Chandonia <JMChandonia(a)lbl.gov> wrote: > > On Mon, May 21, 2012 at 09:01:19AM -0700, Ben Bowen wrote: > >> I'm at a conference most of this week, and will miss today's call. Did > >> anyone see the eclipse yesterday? Vancouver was smothered in heavy fog, > >> and I think it only darkened by a bit during the eclipse. > > > > I'm online, waiting for a chairperson to start the call. > > > > Yesterday, I drove up to Chico to catch the eclipse--it was fun to > > watch with a crowd of astronomy nerds. > > > > JMC > > -- > > John-Marc Chandonia (JMChandonia(a)lbl.gov) We're everywhere... > > Physical Biosciences Division, Berkeley National Lab for your convenience. > > http://www.strgen.org/~jmc/ -- Psi Corps <*> > > _______________________________________________ Microbe mailing list Microbe(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/microbe > > >

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Re: [Microbe] unable to call in for today's call
by Adam Paul Arkin 21 May '12

21 May '12

Yes at 10! A From: Pavel Novichkov <psnovichkov(a)lbl.gov> Date: Mon, 21 May 2012 11:12:49 -0700 To: John-Marc Chandonia <JMChandonia(a)lbl.gov> Cc: Ben Bowen <bpbowen(a)lbl.gov>, KBase Microbes List <Microbe(a)lists.kbase.us> Subject: Re: [Microbe] unable to call in for today's call > Paramvir, Chris, > > I am online too... > Do we have con call today? > P. > > On Monday, May 21, 2012, John-Marc Chandonia <JMChandonia(a)lbl.gov> wrote: >> > On Mon, May 21, 2012 at 09:01:19AM -0700, Ben Bowen wrote: >>> >> I'm at a conference most of this week, and will miss today's call. Did >>> >> anyone see the eclipse yesterday? Vancouver was smothered in heavy fog, >>> >> and I think it only darkened by a bit during the eclipse. >> > >> > I'm online, waiting for a chairperson to start the call. >> > >> > Yesterday, I drove up to Chico to catch the eclipse--it was fun to >> > watch with a crowd of astronomy nerds. >> > >> > JMC >> > -- >> > John-Marc Chandonia (JMChandonia(a)lbl.gov) We're everywhere... >> > Physical Biosciences Division, Berkeley National Lab for your >> convenience. >> > http://www.strgen.org/~jmc/ -- Psi Corps >> <*> >> > _______________________________________________ Microbe mailing list >> Microbe(a)lists.kbase.us https://lists.kbase.us/mailman/listinfo/microbe

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Re: [Microbe] unable to call in for today's call
by Paramvir Dehal 21 May '12

21 May '12

Sorry guys, I'm out of town and forgot to ask someone to take it over. On May 21, 2012 2:12 PM, "Pavel Novichkov" <psnovichkov(a)lbl.gov> wrote: > Paramvir, Chris, > > I am online too... > Do we have con call today? > P. > > On Monday, May 21, 2012, John-Marc Chandonia <JMChandonia(a)lbl.gov> wrote: > > On Mon, May 21, 2012 at 09:01:19AM -0700, Ben Bowen wrote: > >> I'm at a conference most of this week, and will miss today's call. Did > >> anyone see the eclipse yesterday? Vancouver was smothered in heavy fog, > >> and I think it only darkened by a bit during the eclipse. > > > > I'm online, waiting for a chairperson to start the call. > > > > Yesterday, I drove up to Chico to catch the eclipse--it was fun to > > watch with a crowd of astronomy nerds. > > > > JMC > > -- > > John-Marc Chandonia (JMChandonia(a)lbl.gov) We're > everywhere... > > Physical Biosciences Division, Berkeley National Lab for your > convenience. > > http://www.strgen.org/~jmc/ -- Psi > Corps <*> > > > _______________________________________________ > Microbe mailing list > Microbe(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/microbe > >

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Re: [Microbe] unable to call in for today's call
by Pavel Novichkov 21 May '12

21 May '12

Paramvir, Chris, I am online too... Do we have con call today? P. On Monday, May 21, 2012, John-Marc Chandonia <JMChandonia(a)lbl.gov> wrote: > On Mon, May 21, 2012 at 09:01:19AM -0700, Ben Bowen wrote: >> I'm at a conference most of this week, and will miss today's call. Did >> anyone see the eclipse yesterday? Vancouver was smothered in heavy fog, >> and I think it only darkened by a bit during the eclipse. > > I'm online, waiting for a chairperson to start the call. > > Yesterday, I drove up to Chico to catch the eclipse--it was fun to > watch with a crowd of astronomy nerds. > > JMC > -- > John-Marc Chandonia (JMChandonia(a)lbl.gov) We're everywhere... > Physical Biosciences Division, Berkeley National Lab for your convenience. > http://www.strgen.org/~jmc/ -- Psi Corps <*> >

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