Hi Ben,
You should be able to run the service on any computer anywhere. I'll look
into this tomorrow.
Chris
-----Original Message-----
From: Ben Bowen [mailto:[email protected]]
Sent: Tuesday, May 01, 2012 6:30 PM
To: Robert Olson
Cc: Christopher Henry; KBase Microbes List
Subject: Re: [Microbe] FBA and phenotype simulation tutorials
Is this a port blocking problem? or am I doing something wrong?
Tutorial code attached, and error transcript below.
localhost:Running_ModelSEED bpb$ perl testRunModelSeed.pl Error invoking
runfba: 500 Can't connect to
biologin-4.mcs.anl.gov:5000 (connect: Connection refused) at
fbaServicesClient.pm line 57.
I assume that I need to run this from my kbase login (not my computer at
LBL), but I just wanted to check and make sure.
Thanks,
Ben
--------------
Email: BPBowen(a)lbl.gov
Office: 510-486-5138
Cell: 480-225-2341
MS 84RO171, Lawrence Berkeley Lab
On Wed, Apr 25, 2012 at 9:29 PM, Robert Olson <olson(a)mcs.anl.gov> wrote:
> Would you like these added to the kbase.us tutorials pages?
>
> On Apr 25, 2012, at 11:16 PM, Christopher Henry wrote:
>
> Hello all,
>
> Attached are two simple tutorials for the FBA and phenotype simulation
> services.
> The module is checked in to the fbaServices module in the KBase git
> repository.
> Note, I believe some more tweaking of the input and output
> datastructures will be needed, but this is pretty close.
>
> Chris
> <runFBA tutorial.txt><simulatePhenotypes
> Tutorial.txt>_______________________________________________
> Microbe mailing list
> Microbe(a)lists.kbase.us
> https://lists.kbase.us/mailman/listinfo/microbe
>
>
>
> _______________________________________________
> Microbe mailing list
> Microbe(a)lists.kbase.us
> https://lists.kbase.us/mailman/listinfo/microbe
>
Is this a port blocking problem? or am I doing something wrong?
Tutorial code attached, and error transcript below.
localhost:Running_ModelSEED bpb$ perl testRunModelSeed.pl
Error invoking runfba: 500 Can't connect to
biologin-4.mcs.anl.gov:5000 (connect: Connection refused) at
fbaServicesClient.pm line 57.
I assume that I need to run this from my kbase login (not my computer
at LBL), but I just wanted to check and make sure.
Thanks,
Ben
--------------
Email: BPBowen(a)lbl.gov
Office: 510-486-5138
Cell: 480-225-2341
MS 84RO171, Lawrence Berkeley Lab
On Wed, Apr 25, 2012 at 9:29 PM, Robert Olson <olson(a)mcs.anl.gov> wrote:
> Would you like these added to the kbase.us tutorials pages?
>
> On Apr 25, 2012, at 11:16 PM, Christopher Henry wrote:
>
> Hello all,
>
> Attached are two simple tutorials for the FBA and phenotype simulation
> services.
> The module is checked in to the fbaServices module in the KBase git
> repository.
> Note, I believe some more tweaking of the input and output datastructures
> will be needed, but this is pretty close.
>
> Chris
> <runFBA tutorial.txt><simulatePhenotypes
> Tutorial.txt>_______________________________________________
> Microbe mailing list
> Microbe(a)lists.kbase.us
> https://lists.kbase.us/mailman/listinfo/microbe
>
>
>
> _______________________________________________
> Microbe mailing list
> Microbe(a)lists.kbase.us
> https://lists.kbase.us/mailman/listinfo/microbe
>
