November 2011 - Microbe - mailman3.cels.anl.gov

Microbes call summary 11/28
by Paramvir Dehal 28 Nov '11

28 Nov '11

Thanks everyone for participating in today's call. Because of the holidays at the the end of next month, I'd like to move our bi-weekly calls to next Monday 12/5 at 11am PT and Monday 12/19 at 11am PT. Summary: Milestones for our first quarter are due. I will turn them into Bob tomorrow. And I will turn in a narrative the following week. At the DOE Genomics Workshop at the end of February we will have our first "users" meeting. The target is about 40 people, power users, potential contributors, and people generally excited about Kbase. The Microbes team has some new people on loan from Adam: Jason Bauhmol, Marcin Joachimiak and Keith Keller. Pavel has completed an initial set of web services to distribute regulation data and will talk about this at our next meeting. Brian Davidson and I are going to work together to try and create an initial collaborators kit. Action items: 1) Anyone with UI mock-ups should post them to the Kbase Trac Wiki. 2) Identify key people to invite to the Feb meeting. Send me a list of people with their affiliation, science area and some sort of generic priority level. Paramvir

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Microbes Call Reminder
by Paramvir Dehal 28 Nov '11

28 Nov '11

We have our weekly call in 15min. 1-866-740-1260 Code: 4958182# The call should be short, I don't have any urgent agenda items. Agenda: 1) Milestones: Gene & Organism pages 2) Key Collaborators for Feb Meeting 3) New personnel 4) Other items?

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Re: [Microbe] Reminder: Microbes call today
by Keith Keller 14 Nov '11

14 Nov '11

On Mon, Nov 14, 2011 at 12:01 PM, John-Marc Chandonia <JMChandonia(a)lbl.gov> wrote: > Here are my slides from today. Testing it out live requires the > generic MO development password, which Paramvir can give out if > he wants. You can use these credentials: username: kbase password: KBase (note this is case-sensitive) All of our *.tst.microbesonline.org sites are developer sandboxes (which all use the same htpasswd file), so please be patient if it's not always working quickly. Also, please don't share these credentials outside kbase folks. --keith -- Keith Keller kkeller(a)lbl.gov Physical Biosciences Division, Lawrence Berkeley National Lab

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Re: [Microbe] Reminder: Microbes call today
by John-Marc Chandonia 14 Nov '11

14 Nov '11

Here are my slides from today. Testing it out live requires the generic MO development password, which Paramvir can give out if he wants. JMC -- John-Marc Chandonia (JMChandonia(a)lbl.gov) We're everywhere... Physical Biosciences Division, Berkeley National Lab for your convenience. http://www.strgen.org/~jmc/ -- Psi Corps <*>

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Re: [Microbe] Reminder: Microbes call today
by Matt DeJongh 14 Nov '11

14 Nov '11

Here is the link to the CytoSEED screen shots: http://www.cs.hope.edu/cytoseed/ Matt On Mon, Nov 14, 2011 at 1:03 PM, Steven E. Brenner <brenner(a)compbio.berkeley.edu> wrote: > Sorry, got the time wrong. > > On Mon, 14 Nov 2011, Steven E. Brenner wrote: > >> No chairperson? I'm getting hold music and the web site is not loading. >> Is this the right passcode? >> >> On Mon, 14 Nov 2011, Paramvir Dehal wrote: >> >>> John-Marc and Matt are going to talk about Cytoscape and CytoScape Web >>> today. Be sure to login to www.readytalk.com >>> to see the slides. The pass code is: 4958182 >>> >>> >>> 1-866-740-1260 >>> Code: 4958182# > > _______________________________________________ > Microbe mailing list > Microbe(a)lists.kbase.us > https://lists.kbase.us/mailman/listinfo/microbe > > -- Matt DeJongh, Ph.D. Computer Science Department Hope College, Holland, MI 49423 (616) 395-7429

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Re: [Microbe] Reminder: Microbes call today
by Steven E. Brenner 14 Nov '11

14 Nov '11

Sorry, got the time wrong. On Mon, 14 Nov 2011, Steven E. Brenner wrote: > No chairperson? I'm getting hold music and the web site is not loading. Is > this the right passcode? > > On Mon, 14 Nov 2011, Paramvir Dehal wrote: > >> John-Marc and Matt are going to talk about Cytoscape and CytoScape Web >> today. Be sure to login to www.readytalk.com >> to see the slides. The pass code is:ï¿½4958182 >> >> >> 1-866-740-1260 >> Code: 4958182# >

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Re: [Microbe] Reminder: Microbes call today
by Steven E. Brenner 14 Nov '11

14 Nov '11

No chairperson? I'm getting hold music and the web site is not loading. Is this the right passcode? On Mon, 14 Nov 2011, Paramvir Dehal wrote: > John-Marc and Matt are going to talk about Cytoscape and CytoScape Web today. Be sure to login to www.readytalk.com > to see the slides. The pass code is:ï¿½4958182 > > > 1-866-740-1260 > Code: 4958182# >

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Reminder: Microbes call today
by Paramvir Dehal 14 Nov '11

14 Nov '11

John-Marc and Matt are going to talk about Cytoscape and CytoScape Web today. Be sure to login to www.readytalk.com to see the slides. The pass code is: 4958182 1-866-740-1260 Code: 4958182#

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