January 2013 - commits - mailman3.cels.anl.gov

[mpich] MPICH primary repository branch, master, updated. v3.0.2-1-g7e56bfc
by noreply＠mpich.org 31 Jan '13

31 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via 7e56bfc9f79ce102c7b907e7397efa1a278bfd74 (commit) from faa18dd1b7ce815aa57f4a93c8da6e409a303735 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/7e56bfc9f79ce102c7b907e7397efa1a2… commit 7e56bfc9f79ce102c7b907e7397efa1a278bfd74 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Thu Jan 31 14:37:22 2013 -0600 clmake: support more patterns diff --git a/maint/clmake.in b/maint/clmake.in index d12ea06..726675c 100644 --- a/maint/clmake.in +++ b/maint/clmake.in @@ -38,6 +38,7 @@ $rootSrcDir = ""; "[A-Za-z0-9_\/-]*\/icc", "[A-Za-z0-9_\/-]*\/install-sh", "/usr/bin/ar", "mkdir", + "/bin/mkdir", "/usr/ucb/ld", "mpicc", "mpicxx", "compiling ROMIO in", @@ -57,6 +58,7 @@ $rootSrcDir = ""; "Copying Upshot", "Cleaning directory", "[*][*][*][*] Making .*\.\.\.\.", + "Making .* in .*", "Making upshot", "\\s*\$", ); # OtherNoise is an array of patterns that describe blocks of ----------------------------------------------------------------------- Summary of changes: maint/clmake.in | 2 ++ 1 files changed, 2 insertions(+), 0 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository annotated tag, v3.0.2, created. v3.0.2
by noreply＠mpich.org 31 Jan '13

31 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The annotated tag, v3.0.2 has been created at f632b19f4626d5d41b096fb4a07108617d921511 (tag) tagging faa18dd1b7ce815aa57f4a93c8da6e409a303735 (commit) replaces v3.0.1 tagged by Dave Goodell on Wed Jan 30 17:37:11 2013 -0600 - Log ----------------------------------------------------------------- tagging 'v3.0.2' Darius Buntinas (4): Added gtags files to .gitignore Merge branch 'master' of git.mpich.org:mpich Replaced printf with DBG_MSG added DBG message for memcopy Dave Goodell (50): delete "relative" svn:externals dirs delete src/openpa before re-adding via git-subtree Squashed 'src/openpa/' content from commit b48b33c Merge commit 'db40bb8aa2168ffad8f9a681723dff9f8d6c426c' as 'src/openpa' Merge branch 'openpa-subtree' into post-svn-fixes add root-level .gitignore add hydra .gitignore remove SVN version check from autogen.sh convert release.pl to use git instead of svn use _LAYOUT_COMPATIBLE macros for MPI pair-types guard mpi.h clang annotation types fix automake-1.13+ recursive var warning update hydra .gitignore for automake-1.13+ update openpa .gitignore for automake-1.13+ tt#1776: fix platforms missing LLONG_MAX tt#1763: IN_PLACE checking for MPI_Reduce_local fixup for b31a0a6 (reduce_local error test) add a .mailmap file autogen.sh: use `cp -pPR` instead of `cp -a` check accumulate datatype-op compatibility release.pl: more updates for git autogen.sh: just copy "externals" release.pl: properly use "git describe" Revert "check accumulate datatype-op compatibility" clmake: screen more silent-rules patterns add preliminary TAP support index TAP test lines release.pl: chdir out of $tdir runtests: improve TAP output format tt#1784: fix MPL_VG_ macros with valgrind 3.6.0 tt#1785: NBC progress issues with ch3:sock tt#1785: add a symbol for configure testing tt#1786: set MPID_MAX_THREAD_LEVEL in ch3:sock correctly fix TAP output when test prog fails to build TAP: add "# SKIP" directive support runtests: permit arbitrary capitalization in args TAP: add "xfail" support add `xfail=ticketXYZ` annotations to failing tests move MPI_T tests to their own subdir in "manual" fixup for new pvar build system code move new MPI_T tests to manual/mpi_t dir fixups for new MPI_T tests always define stat vars Merge branch 'nemesis-mpit' TAP: missing newline in test plan line TAP: delete summary.tap in "make clean" mark perf/dtpack as xfail update CHANGES for the 3.0.2 release update version.m4 for 3.0.2 release update RELEASE_NOTES for the 3.0.2 release David Goodell (5): [svn-r10799] ROMIO: check whether datatypes are committed [svn-r10800] ROMIO: check for consistent prealloc sizes [svn-r10801] ROMIO: error checking for MPI_Comm and MPI_Info objects [svn-r10820] fix dylib creation on OS X if fortran is disabled [svn-r10821] tt#1771: allow `+` in `--prefix=`, etc. James Dinan (15): [svn-r10808] Removed stale mpix header inclusion in test case [svn-r10809] Removed duplicate declaration from mpi.h.in Linked list construction benchmark test cases Renamed MPI_MUTEX_TAG to MPIX_MUTEX_TAG Removed unnecessary goto statements Implemented interprocess shared memory RMA ops Sock implementation of interprocess shm mutex Shr. Mem. RMA: Flush is now a nop RMA test case: MCS mutex lock/unlock Updated MCS mutex test to also use shr. mem win. Fixed error checks in shr. mem. win. creation Minor cleanup to shr. mem. win error checks Fix error handling bug for struct datatypes Fix poor error handling in RMA code Updated CHANGES for 3.0.2 release Pavan Balaji (9): [svn-r10804] Missed out some mpich2 --> mpich renames. [svn-r10816] Redo the twovec test to get rid of the MPI_Wtick() test which makes no [svn-r10817] Upgrade to hwloc-1.6.1rc1. [svn-r10818] Merge hydra-specific hwloc patches from r10740. [svn-r10819] Added CHANGES log for mpich-3.0.1 and mpich-3.0.2. Upgrade to hwloc-1.6.1. Merge hydra-specific hwloc patches from Update CHANGES file with the hwloc upgrade. Provide a web URL to see the changes in v3.0.1. Qi QC Zhang (1): ensure non-negative counts in MPIC_ funcs Ralf Gunter (3): MPI_T_pvar_read/write now respect the handle creator's count variable Add MPIT variables and corresponding tests. Add configure args to selectively enable MPIT pvars. William Gropp (1): [svn-r10802] Add necessary checks for long long support ----------------------------------------------------------------------- hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, master, updated. v3.0.1-88-gfaa18dd
by noreply＠mpich.org 30 Jan '13

30 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via faa18dd1b7ce815aa57f4a93c8da6e409a303735 (commit) from 2726919fb15aab469342332458e85a78ff661822 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/faa18dd1b7ce815aa57f4a93c8da6e409… commit faa18dd1b7ce815aa57f4a93c8da6e409a303735 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Wed Jan 30 13:45:08 2013 -0600 update RELEASE_NOTES for the 3.0.2 release diff --git a/RELEASE_NOTES b/RELEASE_NOTES index 3bd579d..4d44831 100644 --- a/RELEASE_NOTES +++ b/RELEASE_NOTES @@ -1,15 +1,12 @@ ---------------------------------------------------------------------- - Experimental Features + KNOWN ISSUES ---------------------------------------------------------------------- - * New MPI-3 RMA functionality has been included in this release; - however, it is experimental and not yet supported. Users may try - out this new feature, but they should not rely on its correctness - or performance. +### Large counts ----------------------------------------------------------------------- - KNOWN ISSUES ----------------------------------------------------------------------- + * The new MPI-3 "large count" routines (e.g., MPI_Type_size_x) do not + work correctly due to 64-bit to 32-bit truncations occurring inside + the MPICH library. We expect to fix this in upcoming releases. ### Known runtime failures @@ -48,12 +45,6 @@ ### Build Platforms - * Builds using the native "make" program on OpenSolaris fail unknown - reasons. A workaround is to use GNU Make instead. See the following - ticket for more information: - - https://trac.mpich.org/projects/mpich/ticket/1122 - * Build fails with Intel compiler suite 13.0, because of weak symbol issues in the compiler. A workaround is to disable weak symbol support by passing --disable-weak-symbols to configure. See the @@ -64,6 +55,10 @@ ### Process Managers + * Hydra has a bug related to stdin handling: + + https://trac.mpich.org/projects/mpich/ticket/1782 + * The MPD process manager can only handle relatively small amounts of data on stdin and may also have problems if there is data on stdin that is not consumed by the program. ----------------------------------------------------------------------- Summary of changes: RELEASE_NOTES | 23 +++++++++-------------- 1 files changed, 9 insertions(+), 14 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, master, updated. v3.0.1-87-g2726919
by noreply＠mpich.org 30 Jan '13

30 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via 2726919fb15aab469342332458e85a78ff661822 (commit) from d20626f7e331759564b612729966271c083ba539 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/2726919fb15aab469342332458e85a78f… commit 2726919fb15aab469342332458e85a78ff661822 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Wed Jan 30 13:24:49 2013 -0600 update version.m4 for 3.0.2 release ABI string is bumped from c:r:a of 10:1:0 to 10:2:1. Though changes were made to mpi.h.in, none of them affect "interfaces" in the libtool sense. They merely affect some clang compile-time checking. No reviewer. diff --git a/maint/version.m4 b/maint/version.m4 index 871f140..03dbaab 100644 --- a/maint/version.m4 +++ b/maint/version.m4 @@ -14,7 +14,7 @@ # changing this by playing with diversions, but then we would probably be # playing with autotools-fire. -m4_define([MPICH_VERSION_m4],[3.0.1])dnl +m4_define([MPICH_VERSION_m4],[3.0.2])dnl m4_define([MPICH_RELEASE_DATE_m4],[unreleased development copy])dnl # For libtool ABI versioning rules see: @@ -31,6 +31,6 @@ m4_define([MPICH_RELEASE_DATE_m4],[unreleased development copy])dnl # # 4. If any interfaces have been removed since the last public # release, then set age to 0. -m4_define([libmpich_so_version_m4],[10:1:0])dnl +m4_define([libmpich_so_version_m4],[10:2:0])dnl [#] end of __file__ ----------------------------------------------------------------------- Summary of changes: maint/version.m4 | 4 ++-- 1 files changed, 2 insertions(+), 2 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, master, updated. v3.0.1-86-gd20626f
by noreply＠mpich.org 30 Jan '13

30 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via d20626f7e331759564b612729966271c083ba539 (commit) from ae997a616c48d1ea2db2b43e5a6cc54a3cf3e0d7 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/d20626f7e331759564b612729966271c0… commit d20626f7e331759564b612729966271c083ba539 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Wed Jan 30 13:20:10 2013 -0600 update CHANGES for the 3.0.2 release diff --git a/CHANGES b/CHANGES index 8b0d064..946a654 100644 --- a/CHANGES +++ b/CHANGES @@ -4,12 +4,34 @@ # PM/PMI: Upgrade to hwloc-1.6.1 - # Performance enhancements for shared memory windows. + # RMA: Performance enhancements for shared memory windows. + + # COMPILER INTEGRATION: minor improvements and fixes to the clang static type + checking annotation macros. + + # MPI-IO (ROMIO): improved error checking for user errors, contributed by IBM. + + # MPI-3 TOOLS INTERFACE: new MPI_T performance variables providing information + about nemesis communication behavior and and CH3 message matching queues. + + # TEST SUITE: "make testing" now also outputs a "summary.tap" file that can be + interpreted with standard TAP consumer libraries and tools. The + "summary.xml" format remains unchanged. + + # GIT: This is the first release built from the new git repository at + git.mpich.org. A few build system mechanisms have changed because of this + switch. + + # BUG FIX: resolved a compilation error related to LLONG_MAX that affected + several users (ticket #1776). + + # BUG FIX: nonblocking collectives now properly make progress when MPICH is + configured with the ch3:sock channel (ticket #1785). # Several other minor bug fixes, memory leak fixes, and code cleanup. A full list of changes is available at the following link: - http://git.mpich.org/mpich.git/shortlog/v3.0..v3.0.1 + http://git.mpich.org/mpich.git/shortlog/v3.0.1..v3.0.2 =============================================================================== ----------------------------------------------------------------------- Summary of changes: CHANGES | 26 ++++++++++++++++++++++++-- 1 files changed, 24 insertions(+), 2 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, master, updated. v3.0.1-85-gae997a6
by noreply＠mpich.org 29 Jan '13

29 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via ae997a616c48d1ea2db2b43e5a6cc54a3cf3e0d7 (commit) from 9a1e5444029ef2c2836c683abb40c6ff2e50495c (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/ae997a616c48d1ea2db2b43e5a6cc54a3… commit ae997a616c48d1ea2db2b43e5a6cc54a3cf3e0d7 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Tue Jan 29 15:53:56 2013 -0600 mark perf/dtpack as xfail It doesn't typically fail on my laptop, but it does tend to fail in the nightly tests under certain configurations. references #1789 No reviewer. diff --git a/test/mpi/perf/testlist b/test/mpi/perf/testlist index b81ea53..530bd09 100644 --- a/test/mpi/perf/testlist +++ b/test/mpi/perf/testlist @@ -1,7 +1,7 @@ transp-datatype 2 sendrecvl 2 twovec 1 xfail=ticket1788 -dtpack 1 +dtpack 1 xfail=ticket1789 nestvec 1 xfail=ticket1788 nestvec2 1 xfail=ticket1788 indexperf 1 xfail=ticket1788 ----------------------------------------------------------------------- Summary of changes: test/mpi/perf/testlist | 2 +- 1 files changed, 1 insertions(+), 1 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, master, updated. v3.0.1-84-g9a1e544
by noreply＠mpich.org 29 Jan '13

29 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via 9a1e5444029ef2c2836c683abb40c6ff2e50495c (commit) from 59b8c884a8a6ed18b19e6a75e0b542efa325b143 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/9a1e5444029ef2c2836c683abb40c6ff2… commit 9a1e5444029ef2c2836c683abb40c6ff2e50495c Author: James Dinan <dinan(a)mcs.anl.gov> Date: Tue Jan 29 14:31:27 2013 -0600 Updated CHANGES for 3.0.2 release diff --git a/CHANGES b/CHANGES index 8d312ce..8b0d064 100644 --- a/CHANGES +++ b/CHANGES @@ -4,6 +4,8 @@ # PM/PMI: Upgrade to hwloc-1.6.1 + # Performance enhancements for shared memory windows. + # Several other minor bug fixes, memory leak fixes, and code cleanup. A full list of changes is available at the following link: ----------------------------------------------------------------------- Summary of changes: CHANGES | 2 ++ 1 files changed, 2 insertions(+), 0 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, master, updated. v3.0.1-83-g59b8c88
by noreply＠mpich.org 29 Jan '13

29 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, master has been updated via 59b8c884a8a6ed18b19e6a75e0b542efa325b143 (commit) via 46c1c294dada3edbde7377ab59a6092e68078231 (commit) from d3e1b7542d877c438054b9e40e3719bc7d3b86c5 (commit) Those revisions listed above that are new to this repository have not appeared on any other notification email; so we list those revisions in full, below. - Log ----------------------------------------------------------------- http://git.mpich.org/mpich.git/commitdiff/59b8c884a8a6ed18b19e6a75e0b542efa… commit 59b8c884a8a6ed18b19e6a75e0b542efa325b143 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Mon Jan 28 22:04:19 2013 -0600 TAP: delete summary.tap in "make clean" diff --git a/test/mpi/Makefile.mtest b/test/mpi/Makefile.mtest index d94f681..5017200 100644 --- a/test/mpi/Makefile.mtest +++ b/test/mpi/Makefile.mtest @@ -31,4 +31,4 @@ testing: -mpiexec=${MPIEXEC} -xmlfile=summary.xml \ -tapfile=summary.tap -CLEANFILES = summary.xml +CLEANFILES = summary.xml summary.tap diff --git a/test/mpi/Makefile_cxx.mtest b/test/mpi/Makefile_cxx.mtest index 0e11b03..841a5f2 100644 --- a/test/mpi/Makefile_cxx.mtest +++ b/test/mpi/Makefile_cxx.mtest @@ -26,4 +26,4 @@ testing: $(top_builddir)/runtests -srcdir=$(srcdir) -tests=testlist \ -mpiexec=${MPIEXEC} -xmlfile=summary.xml -CLEANFILES = summary.xml +CLEANFILES = summary.xml summary.tap diff --git a/test/mpi/Makefile_f77.mtest b/test/mpi/Makefile_f77.mtest index 9ea5f2d..e1e6bca 100644 --- a/test/mpi/Makefile_f77.mtest +++ b/test/mpi/Makefile_f77.mtest @@ -33,4 +33,4 @@ testing: $(top_builddir)/runtests -srcdir=$(srcdir) -tests=testlist \ -mpiexec=${MPIEXEC} -xmlfile=summary.xml -CLEANFILES = summary.xml +CLEANFILES = summary.xml summary.tap diff --git a/test/mpi/Makefile_f90.mtest b/test/mpi/Makefile_f90.mtest index ad57087..7530db6 100644 --- a/test/mpi/Makefile_f90.mtest +++ b/test/mpi/Makefile_f90.mtest @@ -23,4 +23,4 @@ testing: $(top_builddir)/runtests -srcdir=$(srcdir) -tests=testlist \ -mpiexec=${MPIEXEC} -xmlfile=summary.xml -CLEANFILES = summary.xml +CLEANFILES = summary.xml summary.tap http://git.mpich.org/mpich.git/commitdiff/46c1c294dada3edbde7377ab59a6092e6… commit 46c1c294dada3edbde7377ab59a6092e68078231 Author: Dave Goodell <goodell(a)mcs.anl.gov> Date: Mon Jan 28 21:31:28 2013 -0600 TAP: missing newline in test plan line diff --git a/test/mpi/runtests.in b/test/mpi/runtests.in index 56b6e39..3dae546 100644 --- a/test/mpi/runtests.in +++ b/test/mpi/runtests.in @@ -252,7 +252,7 @@ if ($xmloutput && $closeXMLOutput) { } if ($tapoutput) { - print TAPOUT "1..$total_seen"; + print TAPOUT "1..$total_seen\n"; close TAPOUT; } ----------------------------------------------------------------------- Summary of changes: test/mpi/Makefile.mtest | 2 +- test/mpi/Makefile_cxx.mtest | 2 +- test/mpi/Makefile_f77.mtest | 2 +- test/mpi/Makefile_f90.mtest | 2 +- test/mpi/runtests.in | 2 +- 5 files changed, 5 insertions(+), 5 deletions(-) hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, portals-work, deleted. v3.0.1-63-g608e384
by noreply＠mpich.org 28 Jan '13

28 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, portals-work has been deleted was 608e3845d35feb8fc2735ca94f54a12f67c798bd ----------------------------------------------------------------------- 608e3845d35feb8fc2735ca94f54a12f67c798bd Various Portals netmod fixes ----------------------------------------------------------------------- hooks/post-receive -- MPICH primary repository

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[mpich] MPICH primary repository branch, dev/portals-work, created. v3.0.1-63-g608e384
by noreply＠mpich.org 28 Jan '13

28 Jan '13

This is an automated email from the git hooks/post-receive script. It was generated because a ref change was pushed to the repository containing the project "MPICH primary repository". The branch, dev/portals-work has been created at 608e3845d35feb8fc2735ca94f54a12f67c798bd (commit) - Log ----------------------------------------------------------------- ----------------------------------------------------------------------- hooks/post-receive -- MPICH primary repository

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