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Subject: Re: Mixed models in analyzing/ interpreting abundance count data
From: "Sarah L. O'Brien" <slobrien1@gmail.com>
In-Reply-To: 
 <CA+6OTkBQDRhx78Gc3yuWVGJQjD6EZW0nbFKf_DJHXE34Gn=OsA@mail.gmail.com>
Date: Thu, 17 Apr 2014 13:44:42 -0500
Cc: Folker Meyer <folker@anl.gov>,
 Will Trimble <wltrimbl@gmail.com>,
 dionlab@igsb.anl.gov,
 Sarah Owens <Sarah.Owens@anl.gov>,
 Darlyn Mishur <mishur@mcs.anl.gov>,
 Folker Meyer <folker.meyer@gmail.com>,
 Dion Antonopoulos <dantonop@gmail.com>
Message-Id: <F9B03A09-F0F5-4D35-8C20-B8A255E4DA25@gmail.com>
References: 
 <CA+6OTkBQDRhx78Gc3yuWVGJQjD6EZW0nbFKf_DJHXE34Gn=OsA@mail.gmail.com>
To: Kevin Keegan <kevin.p.keegan@gmail.com>
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Can you please give us permission to see the doc? I don=92t know what =
you mean by mixed models, but I assume the lit list you=92ve assembled =
will help.

Thanks,
Sv1
__________________
Sarah L. O'Brien, Ph.D.

Assistant Environmental Microbiologist
Institute for Genomics & Systems Biology
Argonne National Laboratory
Building 202 A-329
9700 S. Cass Ave.=20
Argonne, IL 60439
630.252.7854
sobrien@anl.gov

On Apr 17, 2014, at 12:45 PM, Kevin Keegan <kevin.p.keegan@gmail.com> =
wrote:

> Hi All,
>=20
> Folker asked Will and I to lead a discussion about recent literature =
on mixed models; there's been a lot of buz about it recently, and we =
want to get on top of it.
>=20
> We have a list of paper we've been looking at here; feel free to take =
a look and add to it -- let me know if you have any trouble accessing =
it.
>=20
> We're planning to meet next Wednesday or Thursday
> Let me know if you have a preferred day time.
> Right now, we're planning to use our research club slot, Thursday 9:30 =
-10:30,
> bld 240 rm 4313
>=20
> Cheers
> Kevin
>=20
> PS
>=20
> --=20
> Kevin=20
>=20
>=20
> __________________________________
> Kevin P. Keegan, PhD
>=20
> Argonne National Laboratory (work)
> 9700 South Cass Avenue
> Bldg. 240, Rm. 4.G.14
> Argonne, IL 60439
> (630)252-3703
> kkeegan@anl.gov
>=20
> kevin.p.keegan@gmail.com (home)
> (847)733-1079
>=20
>=20


--Apple-Mail=_B50F5DB1-17B4-4FE5-8089-FC7B77478F59
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<html><head><meta http-equiv=3D"Content-Type" content=3D"text/html =
charset=3Dwindows-1252"></head><body style=3D"word-wrap: break-word; =
-webkit-nbsp-mode: space; -webkit-line-break: after-white-space;">Can =
you please give us permission to see the doc? I don=92t know what you =
mean by mixed models, but I assume the lit list you=92ve assembled will =
help.<div><br></div><div>Thanks,</div><div>Sv1<br><div =
apple-content-edited=3D"true">
<span class=3D"Apple-style-span" style=3D"border-collapse: separate; =
color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; =
font-variant: normal; font-weight: normal; letter-spacing: normal; =
line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: =
0px; text-transform: none; white-space: normal; widows: 2; word-spacing: =
0px; -webkit-border-horizontal-spacing: 0px; =
-webkit-border-vertical-spacing: 0px; =
-webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: =
auto; -webkit-text-stroke-width: 0px;  "><span class=3D"Apple-style-span" =
style=3D"border-collapse: separate; color: rgb(0, 0, 0); font-family: =
Helvetica; font-style: normal; font-variant: normal; font-weight: =
normal; letter-spacing: normal; line-height: normal; orphans: 2; =
text-align: -webkit-auto; text-indent: 0px; text-transform: none; =
white-space: normal; widows: 2; word-spacing: 0px; =
-webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: =
0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: =
auto; -webkit-text-stroke-width: 0px;  "><div style=3D"word-wrap: =
break-word; -webkit-nbsp-mode: space; -webkit-line-break: =
after-white-space; "><span class=3D"Apple-style-span" =
style=3D"border-collapse: separate; color: rgb(0, 0, 0); font-family: =
Helvetica;  font-style: normal; font-variant: normal; font-weight: =
normal; letter-spacing: normal; line-height: normal; orphans: 2; =
text-indent: 0px; text-transform: none; white-space: normal; widows: 2; =
word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; =
-webkit-border-vertical-spacing: 0px; =
-webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: =
auto; -webkit-text-stroke-width: 0px; "><div style=3D"word-wrap: =
break-word; -webkit-nbsp-mode: space; -webkit-line-break: =
after-white-space; "><span class=3D"Apple-style-span" =
style=3D"border-collapse: separate; color: rgb(0, 0, 0); font-family: =
Helvetica;  font-style: normal; font-variant: normal; font-weight: =
normal; letter-spacing: normal; line-height: normal; orphans: 2; =
text-indent: 0px; text-transform: none; white-space: normal; widows: 2; =
word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; =
-webkit-border-vertical-spacing: 0px; =
-webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: =
auto; -webkit-text-stroke-width: 0px; "><div style=3D"word-wrap: =
break-word; -webkit-nbsp-mode: space; -webkit-line-break: =
after-white-space; "><span class=3D"Apple-style-span" =
style=3D"border-collapse: separate; color: rgb(0, 0, 0); font-family: =
Helvetica;  font-style: normal; font-variant: normal; font-weight: =
normal; letter-spacing: normal; line-height: normal; orphans: 2; =
text-indent: 0px; text-transform: none; white-space: normal; widows: 2; =
word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; =
-webkit-border-vertical-spacing: 0px; =
-webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: =
auto; -webkit-text-stroke-width: 0px; "><div style=3D"word-wrap: =
break-word; -webkit-nbsp-mode: space; -webkit-line-break: =
after-white-space; ">__________________</div><div style=3D"word-wrap: =
break-word; -webkit-nbsp-mode: space; -webkit-line-break: =
after-white-space; ">Sarah L. O'Brien, Ph.D.<br><br></div><div =
style=3D"word-wrap: break-word; -webkit-nbsp-mode: space; =
-webkit-line-break: after-white-space; ">Assistant Environmental =
Microbiologist</div><div style=3D"word-wrap: break-word; =
-webkit-nbsp-mode: space; -webkit-line-break: after-white-space; =
">Institute for Genomics &amp; Systems Biology<br>Argonne National =
Laboratory<br>Building 202 A-329<br>9700 S. Cass Ave.&nbsp;<br>Argonne, =
IL 60439<br>630.252.7854</div><div style=3D"word-wrap: break-word; =
-webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><a =
href=3D"mailto:sobrien@anl.gov">sobrien@anl.gov</a></div></span></div></sp=
an></div></span></div></span></span>
</div>
<br><div><div>On Apr 17, 2014, at 12:45 PM, Kevin Keegan &lt;<a =
href=3D"mailto:kevin.p.keegan@gmail.com">kevin.p.keegan@gmail.com</a>&gt; =
wrote:</div><br class=3D"Apple-interchange-newline"><blockquote =
type=3D"cite"><div dir=3D"ltr"><div><div><div>Hi All,<br><br>Folker =
asked Will and I to lead a discussion about recent literature on mixed =
models; there's been a lot of buz about it recently, and we want to get =
on top of it.<br><br></div>
<div>We have a list of paper we've been looking at <a =
href=3D"https://docs.google.com/spreadsheet/ccc?key=3D0AhAGeQplFvTidE90T3p=
FdUN5X29zNTVfMVhlR2RCQ3c&amp;usp=3Ddrive_web#gid=3D0">here</a>; feel =
free to take a look and add to it -- let me know if you have any trouble =
accessing it.<br>
</div><div><br>We're planning to meet next Wednesday or Thursday<br>Let =
me know if you have a preferred day time.<br>Right now, we're planning =
to use our research club slot, Thursday 9:30 -10:30,<br>bld 240 rm =
4313<br>
<br></div>Cheers<br></div>Kevin<br><br></div>PS<br><div><br>-- <br>Kevin =
<br><br><br>__________________________________<br>Kevin P. Keegan, =
PhD<br><br>Argonne National Laboratory (work)<br>9700 South Cass =
Avenue<br>
Bldg. 240, Rm. 4.G.14<br>Argonne, IL 60439<br>(630)252-3703<br><a =
href=3D"mailto:kkeegan@anl.gov" =
target=3D"_blank">kkeegan@anl.gov</a><br><br><a =
href=3D"mailto:kevin.p.keegan@gmail.com" =
target=3D"_blank">kevin.p.keegan@gmail.com</a> (home)<br>
(847)733-1079<br><br><br></div></div>
</blockquote></div><br></div></body></html>=

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