Hi Shane, I tagged it this am. I ran it in a developer test mode and it passed all tests. I talked to Chris, the dependency as declared in the deploy.cfg file is non-existent. We can comment out that line in deploy.cfg. I just spoke with Dan about a strategy to deploy. It might be the case that the three of us should sync. Can you do a google hangout now'ish? Tom On Aug 20, 2013, at 10:56 AM, Shane Canon <[email protected]> wrote:

It looks like someone tagged it.

How do we deploy msserver in kbase? What is it?

--Shane

On Aug 20, 2013, at 5:18 AM, Thomas Brettin <[email protected]> wrote:

...

Chris sent an email on 8/7 requesting that the workspace service be re-tagged and re-deployed.

The oldest test tag in git is 20130806-test.

Also, workspace is now dependent on:

mssserver-url=http://biologin-4.mcs.anl.gov:7050

which is not a deployable kbase service.

1) retag, redeploy and retest as per chris's request 2) make msserver deployable in kbase.

On Aug 8, 2013, at 8:07 AM, "Moulton, Steve" <[email protected]> wrote:

...

I'm on it.

-s

-- Steve Moulton UNIX/Linux Systems Engineer Cyber Operations & Research Integration (R&D Support), ITSD Oak Ridge National Laboratory Voice: 865-574-9609 Fax: 865-576-7605 moultonsa at ornl dot gov

-----Original Message----- From: Land, Miriam L. Sent: Thursday, August 08, 2013 8:37 AM To: Moulton, Steve; Dantong Yu; Dan Olson Cc: Thomas Brettin ([email protected]); Matt DeJongh; Christopher Henry Subject: Re: Aug 2013 Build - Workspace service failed initial testing

What does the deployment team think about this? The version on the test VM has passed testing.

Miriam

On 8/7/13 7:32 PM, "Christopher Henry" <[email protected]> wrote:

...

Can we update the workspace_service being deployed to the code I just committed to master (the latest master branch)? I just submitted a new function that allows us to pull multiple objects from the workspace at once. It's needed to clear up an outstanding ticket in JIRA. Tests all appear to be working.

On Aug 7, 2013, at 1:18 PM, Matt DeJongh <[email protected]> wrote:

...

I restarted the workspace_service and the tests all passed.

Matt

On Wed, Aug 7, 2013 at 12:35 PM, Matt DeJongh <[email protected]> wrote: I restarted the localhost mongod process and the server tests pass now.

Matt

On Tue, Aug 6, 2013 at 1:41 PM, Land, Miriam L. <[email protected]> wrote: Chris and Matt,

The module workspace service failed the Œmake test¹. It was run from the experiment VM on Magellan. You can replicate this by logging into the VM using:

ssh 140.221.84.191

sudo su

ssh <module_name>

source /kb/deployment/user-env.sh

cd /kb/dev_container/modules/<module_name>

This info is also given in https://trac.kbase.us/projects/kbase/wiki/TestingOverview. Some errors could be due to the configuration, the actual tests, or dependencies. Please work with the deployment team (Dan O., Dantong and Steve M.) if you believe that the problems are out of your control.

Warning: As root, you can make edits here but you will not be able to commit changes to the git repo.

Below is the error message that I got.

Miriam

------------------------------------------------------------------------- --------------

Summary of workspace service

make test

../../tools/Makefile.common.rules:36: warning: overriding commands for target `deploy-libs'

Makefile:102: warning: ignoring old commands for target `deploy-libs'

for t in server-tests/workspaceServiceImpl.t ; do \

if [ -f $t ] ; then \

/kb/runtime/bin/prove $t ; \

if [ $? -ne 0 ] ; then \

exit 1 ; \

fi \

fi \

done

server-tests/workspaceServiceImpl.t .. ***Starting workspace service with mongo parameters:***

Host: localhost

Database: workspace_test

User:

Can't use string ("not master") as a HASH ref while "strict refs" in use at /kb/runtime/lib/perl5/site_perl/5.16.2/x86_64-linux/MongoDB/Collection.pm line 424.

server-tests/workspaceServiceImpl.t .. Dubious, test returned 255 (wstat 65280, 0xff00)

No subtests run

Test Summary Report

-------------------

server-tests/workspaceServiceImpl.t (Wstat: 65280 Tests: 0 Failed: 0)

Non-zero exit status: 255

Parse errors: No plan found in TAP output

Files=1, Tests=0, 3 wallclock secs ( 0.03 usr 0.01 sys + 0.46 cusr 0.12 csys = 0.62 CPU)

Result: FAIL

make: *** [test-service] Error 1

-- Matt DeJongh, Ph.D. Computer Science Department Hope College, Holland, MI 49423 (616) 395-7429

-- Matt DeJongh, Ph.D. Computer Science Department Hope College, Holland, MI 49423 (616) 395-7429

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