That's a good option too. On Nov 23, 2013, at 10:03 AM, "Murphy-Olson, Daniel E." <[email protected]> wrote:

We do have the cs database dumps on the FTP server, if they are just looking for raw data.

--Dan

...

On Nov 22, 2013, at 11:21 PM, "Thomas Brettin" <[email protected]> wrote:

You can tell them what commands to use from the CLI.

That's what I would probably do.

t

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On Nov 22, 2013, at 12:51 PM, Nomi Harris <[email protected]> wrote:

A user asked (in https://atlassian.kbase.us/browse/KBASE-474):

...

I noticed that KBase has a lot of genome sequences and annotations of metabolic networks. Is there anyway I can get a hold of these data? If not on KBase, do you have any suggestions for where to get, e.g. SEED annotations? Thanks!

This seems like a pretty basic question, but I wasn’t sure what to tell them. Search is not functional right now, but I’m not sure that would be the right way to bulk-download data anyway. There are probably Iris commands that could do this, but what are they? We have no plan to offer bulk data dumps for people to download, right? (I’m not saying we should.)

Any advice?

Thanks, Nomi _______________________________________________ Release-team mailing list [email protected] https://lists.kbase.us/mailman/listinfo/release-team

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