The two exceptions are 'sim_service', which is not deploying API docs at all (needs to add the proper doc generation and deployment code to its Makefile), and 'search', which was deployed to a test VM that I couldn't find (not available from t1 by ssh search ??), and has no docs appearing here:
http://140.221.84.191/services/docs/search/
In addition, several modules do have proper documentation that seems to be properly deployed, but is not appearing here:
http://140.221.84.191/services/docs . It's probably just a proxy issue, but here is the list of those modules:
auth_service
cluster_service
expression
KBaseFBAModeling
plant_expression_service