October 2014 - Nightly-build - mailman3.cels.anl.gov

next.kbase.us Nightly Build Report
by nightly-build＠kbase.us 31 Oct '14

31 Oct '14

Check status of services: https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… Services deployed successfully: authorization Services deployed successfully: cdmi_api Services deployed successfully: UserAndJobState Services deployed successfully: HandleMngr, Workspace Services deployed successfully: translation Services deployed successfully: CompressionBasedDistance Services deployed successfully: protein_info_service Services deployed successfully: fbaModelServices Services deployed successfully: trees Services deployed successfully: m5nr Services deployed successfully: KmerAnnotationByFigfam Services deployed successfully: id_map Services deployed successfully: KBaseExpression Services deployed successfully: probabilistic_annotation Services deployed successfully: genome_annotation Services deployed successfully: idserver Services deployed successfully: workspaceService Services deployed successfully: handle_service Services deployed successfully: meme Services deployed successfully: networks Services deployed successfully: ontology_service Services deployed successfully: plant_expression_service Services deployed successfully: Workspace, invocation, cdmi_api, translation, CompressionBasedDistance, protein_info_service, trees, fbaModelServices, probabilistic_annotation, genome_annotation, genotype_phenotype_api, idserver, handle_service, ontology_service, plant_expression_service, kmer_annotation_figfam, meme, networks, CoExpression, KBaseExpression Services deployed successfully: CoExpression Services deployed successfully: genome_comparison Services deployed successfully: AmethstService Services deployed successfully: KBaseProteinStructure Services deployed successfully: erdb Services deployed successfully: Services deployed successfully: search

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Keith Keller 30 Oct '14

30 Oct '14

On Thu, Oct 30, 2014 at 9:15 PM, Keith Keller <kkeller(a)lbl.gov> wrote: > On Thu, Oct 30, 2014 at 8:56 PM, Keith Keller <kkeller(a)lbl.gov> wrote: >> It worked! Both in that everything seems to have been successfully >> redeployed, and that the message made it to the nightly-builds list. > > Hmm, or not: workspace is reporting an error. I'm checking it out now. Not sure what happened; I unwisely restarted a deploy on the node before looking at the deploy log. That deploy worked fine. I'll see what happens tomorrow. --keith -- Keith Keller kkeller(a)lbl.gov Physical Biosciences Division, Lawrence Berkeley National Lab

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Keith Keller 30 Oct '14

30 Oct '14

On Thu, Oct 30, 2014 at 8:56 PM, Keith Keller <kkeller(a)lbl.gov> wrote: > It worked! Both in that everything seems to have been successfully > redeployed, and that the message made it to the nightly-builds list. Hmm, or not: workspace is reporting an error. I'm checking it out now. --keith -- Keith Keller kkeller(a)lbl.gov Physical Biosciences Division, Lawrence Berkeley National Lab

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Keith Keller 30 Oct '14

30 Oct '14

It worked! Both in that everything seems to have been successfully redeployed, and that the message made it to the nightly-builds list. --keith On Thu, Oct 30, 2014 at 8:48 PM, <nightly-build(a)kbase.us> wrote: > Check status of services: https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… > > Services deployed successfully: authorization > Services deployed successfully: cdmi_api > Services deployed successfully: UserAndJobState > Services deployed successfully: HandleMngr, Workspace > Services deployed successfully: translation > Services deployed successfully: CompressionBasedDistance > Services deployed successfully: protein_info_service > Services deployed successfully: fbaModelServices > Services deployed successfully: trees > Services deployed successfully: m5nr > Services deployed successfully: KmerAnnotationByFigfam > Services deployed successfully: id_map > Services deployed successfully: KBaseExpression > Services deployed successfully: probabilistic_annotation > Services deployed successfully: genome_annotation > Services deployed successfully: idserver > Services deployed successfully: workspaceService > Services deployed successfully: handle_service > Services deployed successfully: meme > Services deployed successfully: networks > Services deployed successfully: ontology_service > Services deployed successfully: plant_expression_service > Services deployed successfully: Workspace, invocation, cdmi_api, translation, CompressionBasedDistance, protein_info_service, trees, fbaModelServices, probabilistic_annotation, genome_annotation, genotype_phenotype_api, idserver, handle_service, ontology_service, plant_expression_service, kmer_annotation_figfam, meme, networks, CoExpression, KBaseExpression > Services deployed successfully: CoExpression > Services deployed successfully: genome_comparison > Services deployed successfully: AmethstService > Services deployed successfully: KBaseProteinStructure > Services deployed successfully: erdb > Services deployed successfully: > Services deployed successfully: search -- Keith Keller kkeller(a)lbl.gov Physical Biosciences Division, Lawrence Berkeley National Lab

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next.kbase.us Nightly Build Report
by nightly-build＠kbase.us 30 Oct '14

30 Oct '14

Check status of services: https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… Services deployed successfully: authorization Services deployed successfully: cdmi_api Services deployed successfully: UserAndJobState Services deployed successfully: HandleMngr, Workspace Services deployed successfully: translation Services deployed successfully: CompressionBasedDistance Services deployed successfully: protein_info_service Services deployed successfully: fbaModelServices Services deployed successfully: trees Services deployed successfully: m5nr Services deployed successfully: KmerAnnotationByFigfam Services deployed successfully: id_map Services deployed successfully: KBaseExpression Services deployed successfully: probabilistic_annotation Services deployed successfully: genome_annotation Services deployed successfully: idserver Services deployed successfully: workspaceService Services deployed successfully: handle_service Services deployed successfully: meme Services deployed successfully: networks Services deployed successfully: ontology_service Services deployed successfully: plant_expression_service Services deployed successfully: Workspace, invocation, cdmi_api, translation, CompressionBasedDistance, protein_info_service, trees, fbaModelServices, probabilistic_annotation, genome_annotation, genotype_phenotype_api, idserver, handle_service, ontology_service, plant_expression_service, kmer_annotation_figfam, meme, networks, CoExpression, KBaseExpression Services deployed successfully: CoExpression Services deployed successfully: genome_comparison Services deployed successfully: AmethstService Services deployed successfully: KBaseProteinStructure Services deployed successfully: erdb Services deployed successfully: Services deployed successfully: search

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Keith Keller 30 Oct '14

30 Oct '14

Search failed because git.kbase was not available. -k -- Keith Keller Physical Biosciences Division (sent from mobile) On Oct 30, 2014 8:49 AM, <nightly-build(a)kbase.us> wrote: > Check status of services: > https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… > > Services deployed successfully: authorization > Services deployed successfully: cdmi_api > Services deployed successfully: UserAndJobState > Services deployed successfully: HandleMngr, Workspace > Services deployed successfully: translation > Services deployed successfully: CompressionBasedDistance > Services deployed successfully: protein_info_service > Services deployed successfully: fbaModelServices > Services deployed successfully: trees > Services deployed successfully: m5nr > Services deployed successfully: KmerAnnotationByFigfam > Services deployed successfully: id_map > Services deployed successfully: KBaseExpression > Services deployed successfully: probabilistic_annotation > Services deployed successfully: genome_annotation > Services deployed successfully: idserver > Services deployed successfully: workspaceService > Services deployed successfully: handle_service > Services deployed successfully: meme > Services deployed successfully: networks > Services deployed successfully: ontology_service > Services deployed successfully: plant_expression_service > Services deployed successfully: Workspace, invocation, cdmi_api, > translation, CompressionBasedDistance, protein_info_service, trees, > fbaModelServices, probabilistic_annotation, genome_annotation, > genotype_phenotype_api, idserver, handle_service, ontology_service, > plant_expression_service, kmer_annotation_figfam, meme, networks, > CoExpression, KBaseExpression > Services deployed successfully: CoExpression > Services deployed successfully: genome_comparison > Services deployed successfully: AmethstService > Services deployed successfully: KBaseProteinStructure > Services deployed successfully: erdb > Services deployed successfully: >

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next.kbase.us Nightly Build Report
by nightly-build＠kbase.us 30 Oct '14

30 Oct '14

Check status of services: https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… Services deployed successfully: authorization Services deployed successfully: cdmi_api Services deployed successfully: UserAndJobState Services deployed successfully: HandleMngr, Workspace Services deployed successfully: translation Services deployed successfully: CompressionBasedDistance Services deployed successfully: protein_info_service Services deployed successfully: fbaModelServices Services deployed successfully: trees Services deployed successfully: m5nr Services deployed successfully: KmerAnnotationByFigfam Services deployed successfully: id_map Services deployed successfully: KBaseExpression Services deployed successfully: probabilistic_annotation Services deployed successfully: genome_annotation Services deployed successfully: idserver Services deployed successfully: workspaceService Services deployed successfully: handle_service Services deployed successfully: meme Services deployed successfully: networks Services deployed successfully: ontology_service Services deployed successfully: plant_expression_service Services deployed successfully: Workspace, invocation, cdmi_api, translation, CompressionBasedDistance, protein_info_service, trees, fbaModelServices, probabilistic_annotation, genome_annotation, genotype_phenotype_api, idserver, handle_service, ontology_service, plant_expression_service, kmer_annotation_figfam, meme, networks, CoExpression, KBaseExpression Services deployed successfully: CoExpression Services deployed successfully: genome_comparison Services deployed successfully: AmethstService Services deployed successfully: KBaseProteinStructure Services deployed successfully: erdb Services deployed successfully:

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Keith Keller 29 Oct '14

29 Oct '14

Cool! I will check that it goes through tomorrow. -k -- Keith Keller Physical Biosciences Division (sent from mobile) On Oct 29, 2014 9:38 PM, "Murphy-Olson, Daniel E." <dolson(a)mcs.anl.gov> wrote: > I did. I added the nightly-build sender to the accepts list. > ________________________________________ > From: Keith Keller [kkeller(a)lbl.gov] > Sent: Wednesday, October 29, 2014 11:18 PM > To: nightly-build(a)kbase.us > Cc: nightly-build(a)lists.kbase.us; Murphy-Olson, Daniel E.; Shane Canon > Subject: Re: next.kbase.us Nightly Build Report > > Hey Dan, did you get a moderator message about this report email? I > got the message in my own box, but I don't see it in the list > archives. > > --keith > > On Wed, Oct 29, 2014 at 8:48 PM, <nightly-build(a)kbase.us> wrote: > > Check status of services: > https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… > > > > Services deployed successfully: authorization > > Services deployed successfully: cdmi_api > > Services deployed successfully: UserAndJobState > > Services deployed successfully: HandleMngr, Workspace > > Services deployed successfully: translation > > Services deployed successfully: CompressionBasedDistance > > Services deployed successfully: protein_info_service > > Services deployed successfully: fbaModelServices > > Services deployed successfully: trees > > Services deployed successfully: m5nr > > Services deployed successfully: KmerAnnotationByFigfam > > Services deployed successfully: id_map > > Services deployed successfully: KBaseExpression > > Services deployed successfully: probabilistic_annotation > > Services deployed successfully: genome_annotation > > Services deployed successfully: idserver > > Services deployed successfully: workspaceService > > Services deployed successfully: handle_service > > Services deployed successfully: meme > > Services deployed successfully: networks > > Services deployed successfully: ontology_service > > Services deployed successfully: plant_expression_service > > Services deployed successfully: Workspace, invocation, cdmi_api, > translation, CompressionBasedDistance, protein_info_service, trees, > fbaModelServices, probabilistic_annotation, genome_annotation, > genotype_phenotype_api, idserver, handle_service, ontology_service, > plant_expression_service, kmer_annotation_figfam, meme, networks, > CoExpression, KBaseExpression > > Services deployed successfully: CoExpression > > Services deployed successfully: genome_comparison > > Services deployed successfully: AmethstService > > Services deployed successfully: KBaseProteinStructure > > Services deployed successfully: erdb > > Services deployed successfully: > > Services deployed successfully: search > > > > -- > Keith Keller > kkeller(a)lbl.gov > Physical Biosciences Division, Lawrence Berkeley National Lab >

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Murphy-Olson, Daniel E. 29 Oct '14

29 Oct '14

I did. I added the nightly-build sender to the accepts list. ________________________________________ From: Keith Keller [kkeller(a)lbl.gov] Sent: Wednesday, October 29, 2014 11:18 PM To: nightly-build(a)kbase.us Cc: nightly-build(a)lists.kbase.us; Murphy-Olson, Daniel E.; Shane Canon Subject: Re: next.kbase.us Nightly Build Report Hey Dan, did you get a moderator message about this report email? I got the message in my own box, but I don't see it in the list archives. --keith On Wed, Oct 29, 2014 at 8:48 PM, <nightly-build(a)kbase.us> wrote: > Check status of services: https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… > > Services deployed successfully: authorization > Services deployed successfully: cdmi_api > Services deployed successfully: UserAndJobState > Services deployed successfully: HandleMngr, Workspace > Services deployed successfully: translation > Services deployed successfully: CompressionBasedDistance > Services deployed successfully: protein_info_service > Services deployed successfully: fbaModelServices > Services deployed successfully: trees > Services deployed successfully: m5nr > Services deployed successfully: KmerAnnotationByFigfam > Services deployed successfully: id_map > Services deployed successfully: KBaseExpression > Services deployed successfully: probabilistic_annotation > Services deployed successfully: genome_annotation > Services deployed successfully: idserver > Services deployed successfully: workspaceService > Services deployed successfully: handle_service > Services deployed successfully: meme > Services deployed successfully: networks > Services deployed successfully: ontology_service > Services deployed successfully: plant_expression_service > Services deployed successfully: Workspace, invocation, cdmi_api, translation, CompressionBasedDistance, protein_info_service, trees, fbaModelServices, probabilistic_annotation, genome_annotation, genotype_phenotype_api, idserver, handle_service, ontology_service, plant_expression_service, kmer_annotation_figfam, meme, networks, CoExpression, KBaseExpression > Services deployed successfully: CoExpression > Services deployed successfully: genome_comparison > Services deployed successfully: AmethstService > Services deployed successfully: KBaseProteinStructure > Services deployed successfully: erdb > Services deployed successfully: > Services deployed successfully: search -- Keith Keller kkeller(a)lbl.gov Physical Biosciences Division, Lawrence Berkeley National Lab

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Re: [Nightly-build] next.kbase.us Nightly Build Report
by Keith Keller 29 Oct '14

29 Oct '14

Hey Dan, did you get a moderator message about this report email? I got the message in my own box, but I don't see it in the list archives. --keith On Wed, Oct 29, 2014 at 8:48 PM, <nightly-build(a)kbase.us> wrote: > Check status of services: https://monitor.kbase.us/check_mk/view.py?view_name=host&site=berkeley&host… > > Services deployed successfully: authorization > Services deployed successfully: cdmi_api > Services deployed successfully: UserAndJobState > Services deployed successfully: HandleMngr, Workspace > Services deployed successfully: translation > Services deployed successfully: CompressionBasedDistance > Services deployed successfully: protein_info_service > Services deployed successfully: fbaModelServices > Services deployed successfully: trees > Services deployed successfully: m5nr > Services deployed successfully: KmerAnnotationByFigfam > Services deployed successfully: id_map > Services deployed successfully: KBaseExpression > Services deployed successfully: probabilistic_annotation > Services deployed successfully: genome_annotation > Services deployed successfully: idserver > Services deployed successfully: workspaceService > Services deployed successfully: handle_service > Services deployed successfully: meme > Services deployed successfully: networks > Services deployed successfully: ontology_service > Services deployed successfully: plant_expression_service > Services deployed successfully: Workspace, invocation, cdmi_api, translation, CompressionBasedDistance, protein_info_service, trees, fbaModelServices, probabilistic_annotation, genome_annotation, genotype_phenotype_api, idserver, handle_service, ontology_service, plant_expression_service, kmer_annotation_figfam, meme, networks, CoExpression, KBaseExpression > Services deployed successfully: CoExpression > Services deployed successfully: genome_comparison > Services deployed successfully: AmethstService > Services deployed successfully: KBaseProteinStructure > Services deployed successfully: erdb > Services deployed successfully: > Services deployed successfully: search -- Keith Keller kkeller(a)lbl.gov Physical Biosciences Division, Lawrence Berkeley National Lab

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