Can you and/or Andi meet with Matt, Mike, and Paramvir about linking KBase genomes to metagenome phylotype presence instead, or has that meeting already happened?

Thanks,
- Dylan



On Thu, May 16, 2013 at 12:03 PM, Folker Meyer <folker.meyer@gmail.com> wrote:
Hi

I am on the call. Nobody else is. 

I assume it is not happening. 

Best,
Folker

--
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On May 16, 2013, at 13:28, Dylan Chivian <dcchivian@lbl.gov> wrote:

Paramvir is a stakeholder here, so we should get his input, including on which identity thresholds he'd like to see.

Thanks,
- Dylan


On Thu, May 16, 2013 at 11:10 AM, Dylan Chivian <dcchivian@lbl.gov> wrote:
Hi guys,

instead of the call today, probably the time would be best spent with Folker and Andreas working with Matt and Mike directly on the metagenomics species search functionality for the Taxon pages.  I expect it is an expensive operation, so it is probably something that should be a one-time compute and stored somewhere associated with each taxon rather than on-the-fly when someone calls up the Taxon page.  There should probably also be separate lists for 99% identity and 97% identity (not sure other thresholds make any sense).

Thoughts?  Are there other things to discuss and we should have the call anyway?

Thanks,
- Dylan


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