[LCRC Accounts] Project Request: MG-RAST_NEC
Hello, A new project on the LCRC cluster has been requested. Please forward the information on to the LCRC Allocation sub-committee. Applicant's name: Folker Meyer Applicant's institution: ANL Applicant's division: IGSB Project Name: MG-RAST_NEC Project title: Analysis of NEC metagenomes. Associated funding: NIH Other Systems: Science: Annotation of metagenomic data from a large scale study of NEC twins. (NEC= necrotizing entero colitis) a medical condition primarily seen in premature infants. Understanding the role of microbiota through metagenomics will provide key insights to understanding the disease. Project description: Running sequence similarity searches using a variety of algorithms including BLAST, BLAT, uclust, vmatch against a large non-redundant sequence database. Project URL: Requested allocation: 580,000 Justification: "During the last allocation we have scaled up from running single node jobs to jobs of an arbitrary size. Additionally we worked to efficiently utilize backfill time slots due to the flexible run time of our code. Over the next allocation we plan to experiment with new more efficient algorithms that will make use of the large memory nodes." The requester has used 0 hours of their initial startup project. In addition to approving an initial amount, please specify a Category and Subcategory for this project. For a list of the current selection of approved categories, please see: https://wiki.lcrc.anl.gov/wiki/Processes/Categories Once the Allocation committee has approved the project, please go to the Project Management page to create it: https://accounts.lcrc.anl.gov/projects.php Thank You, The LCRC Accounts System
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